RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 EML4Q9HC35 981 aaKnown RBP10.62□□□□□ -0.71
LIMS2-210ENST00000413578 EXOSC3Q9NQT5 275 aaKnown RBP10.62□□□□□ -0.71
LIMS2-210ENST00000413578 MKS1Q9NXB0 559 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 MID2Q9UJV3 735 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 SLC35A3Q9Y2D2 325 aa10.62□□□□□ -0.71
LIMS2-210ENST00000413578 ARFGEF3Q5TH69 2177 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 HAX1O00165 279 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 SCN2BO60939 215 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 PRPS1L1P21108 318 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 MAGEA8P43361 318 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 ZSWIM7Q19AV6 140 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 ATP6AP1LQ52LC2 224 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 C9orf135Q5VTT2 229 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 CASP12Q6UXS9 341 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 FRRS1Q6ZNA5 592 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 IFT20Q8IY31 132 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 CLECL1Q8IZS7 167 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 C4orf33Q8N1A6 199 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 CLEC4FQ8N1N0 589 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 TMEM45BQ96B21 275 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 ZG16BQ96DA0 208 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 FBXO17Q96EF6 278 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 DNAJA3Q96EY1 480 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 FOXN4Q96NZ1 517 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 PRPF18Q99633 342 aaKnown RBP10.61□□□□□ -0.71
LIMS2-210ENST00000413578 PIMREGQ9BSJ6 248 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 POLE3Q9NRF9 147 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 TMEM181Q9P2C4 612 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 MOKQ9UQ07 419 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 SLC9A8Q9Y2E8 581 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 FKBP7Q9Y680 259 aa10.61□□□□□ -0.71
LIMS2-210ENST00000413578 RNF103-CHMP3A0A140T963 221 aa10.6□□□□□ -0.71
LIMS2-210ENST00000413578 LOC390937A0A1W2PQ73 354 aa10.6□□□□□ -0.71
LIMS2-210ENST00000413578 PRAMEF27A3QJZ7 478 aa10.6□□□□□ -0.71
LIMS2-210ENST00000413578 CLDN24A6NM45 220 aa10.6□□□□□ -0.71
LIMS2-210ENST00000413578 RNASET2O00584 256 aaKnown RBP10.6□□□□□ -0.71
LIMS2-210ENST00000413578 ZNF208O43345 1280 aa10.6□□□□□ -0.71
LIMS2-210ENST00000413578 EIF1BO60739 113 aaKnown RBP10.6□□□□□ -0.71
LIMS2-210ENST00000413578 SLU7O95391 586 aaKnown RBP10.6□□□□□ -0.71
LIMS2-210ENST00000413578 G6PDP11413 515 aa10.6□□□□□ -0.71
LIMS2-210ENST00000413578 APEHP13798 732 aaKnown RBP10.6□□□□□ -0.71
LIMS2-210ENST00000413578 ZNF23P17027 643 aa10.6□□□□□ -0.71
LIMS2-210ENST00000413578 HNF1AP20823 631 aa10.6□□□□□ -0.71
LIMS2-210ENST00000413578 MPGP29372 298 aa10.6□□□□□ -0.71
LIMS2-210ENST00000413578 ALDH3A1P30838 453 aa10.6□□□□□ -0.71
LIMS2-210ENST00000413578 SOAT1P35610 550 aa10.6□□□□□ -0.71
LIMS2-210ENST00000413578 TGFBR3Q03167 851 aa10.6□□□□□ -0.71
LIMS2-210ENST00000413578 SQLEQ14534 574 aa10.6□□□□□ -0.71
LIMS2-210ENST00000413578 ZIC4Q8N9L1 334 aa10.6□□□□□ -0.71
LIMS2-210ENST00000413578 FNDC5Q8NAU1 212 aa10.6□□□□□ -0.71
LIMS2-210ENST00000413578 ZNF563Q8TA94 476 aa10.6□□□□□ -0.71
LIMS2-210ENST00000413578 SLC35G5Q96KT7 338 aa10.6□□□□□ -0.71
LIMS2-210ENST00000413578 BPESC1Q9GZL8 116 aa10.6□□□□□ -0.71
LIMS2-210ENST00000413578 OR51I1Q9H343 314 aa10.6□□□□□ -0.71
LIMS2-210ENST00000413578 PPCSQ9HAB8 311 aa10.6□□□□□ -0.71
LIMS2-210ENST00000413578 MYOZ1Q9NP98 299 aaPredicted RBP10.6□□□□□ -0.71
LIMS2-210ENST00000413578 PARPBPQ9NWS1 579 aa10.6□□□□□ -0.71
LIMS2-210ENST00000413578 ASIC5Q9NY37 505 aa10.6□□□□□ -0.71
LIMS2-210ENST00000413578 PCDHGB4Q9UN71 923 aa10.6□□□□□ -0.71
LIMS2-210ENST00000413578 IGHV1-18A0A0C4DH31 117 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 TMEM72A0PK05 275 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 CFLARO15519 480 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 PDE5AO76074 875 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 OR12D1P0DN82 309 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 RYKP34925 604 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 HTR3AP46098 478 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 CLDN8P56748 225 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 OR2B6P58173 313 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 PRPS1P60891 318 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 KCNJ10P78508 379 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 EFNB3Q15768 340 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 CR1LQ2VPA4 569 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 HIKESHIQ53FT3 197 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 SAXO2Q658L1 398 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 OR4F3Q6IEY1 312 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 PAQR6Q6TCH4 344 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 GSPT2Q8IYD1 628 aaKnown RBP10.59□□□□□ -0.71
LIMS2-210ENST00000413578 ANKS4BQ8N8V4 417 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 OR8J2Q8NGG1 315 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 EPS8L3Q8TE67 593 aaKnown RBP10.59□□□□□ -0.71
LIMS2-210ENST00000413578 MECRQ9BV79 373 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 PLK3Q9H4B4 646 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 OBP2BQ9NPH6 170 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 EXD2Q9NVH0 621 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 CRNNQ9UBG3 495 aaPredicted RBP10.59□□□□□ -0.71
LIMS2-210ENST00000413578 UPB1Q9UBR1 384 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 ZDHHC2Q9UIJ5 367 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 OSGIN1Q9UJX0 560 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 WDR45Q9Y484 360 aa10.59□□□□□ -0.71
LIMS2-210ENST00000413578 NUP214P35658 2090 aaPredicted RBP10.59□□□□□ -0.71
LIMS2-210ENST00000413578 TMED7-TICAM2A0A0A6YYA0 188 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 ZC3H12DA2A288 527 aaKnown RBP10.58□□□□□ -0.72
LIMS2-210ENST00000413578 B9A039 149 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 FAAHO00519 579 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 AGR2O95994 175 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 WNT11O96014 354 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 TGFAP01135 160 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 TACSTD2P09758 323 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 GIFP27352 417 aa10.58□□□□□ -0.72
LIMS2-210ENST00000413578 SERPINF1P36955 418 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms