RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 TMUB2Q71RG4 321 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 TMEM179BQ7Z7N9 219 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 ZNF605Q86T29 641 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 CBWD2Q8IUF1 395 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 SULF2Q8IWU5 870 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 TBC1D3Q8IZP1 549 aaPredicted RBP4.84□□□□□ -1.63
HERC4-205ENST00000412272 LRRC52Q8N7C0 313 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 OR2M7Q8NG81 312 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 TERB2Q8NHR7 220 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 SMIM12Q96EX1 92 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 GPR20Q99678 358 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 METTL17Q9H7H0 456 aaPredicted RBP4.84□□□□□ -1.63
HERC4-205ENST00000412272 AIG1Q9NVV5 245 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 PIPOXQ9P0Z9 390 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 DUX4Q9UBX2 424 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 LSM2Q9Y333 95 aaKnown RBP4.84□□□□□ -1.63
HERC4-205ENST00000412272 MTCL1Q9Y4B5 1905 aaKnown RBP4.84□□□□□ -1.63
HERC4-205ENST00000412272 ZSWIM8A7E2V4 1837 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 A0A1W2PRV1 198 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 OR6C76A6NM76 312 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 C9J4A7 227 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 LZTS3O60299 673 aaPredicted RBP4.84□□□□□ -1.63
HERC4-205ENST00000412272 APODP05090 189 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 CKMP06732 381 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 ATXN8OSP0DMR3 200 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 CD8BP10966 210 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 DRD2P14416 443 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 BCKDHBP21953 392 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 MIPP30301 263 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 MC4RP32245 332 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 SOX3P41225 446 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 LGALS7P47929 136 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 TNFSF10P50591 281 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 HCCSP53701 268 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 F2RL1P55085 397 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 ID2Q02363 134 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 TGM3Q08188 693 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 SLC10A7Q0GE19 358 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 TCP10Q12799 353 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 RBM39Q14498 530 aaKnown RBP4.84□□□□□ -1.63
HERC4-205ENST00000412272 JOSD1Q15040 202 aaPredicted RBP4.84□□□□□ -1.63
HERC4-205ENST00000412272 NKG7Q16617 165 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 FAM98CQ17RN3 349 aaKnown RBP4.84□□□□□ -1.63
HERC4-205ENST00000412272 SMIM21Q3B7S5 101 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 NPNTQ6UXI9 565 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 B3GLCTQ6Y288 498 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 CILP2Q8IUL8 1156 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 GPD1LQ8N335 351 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 Q8N402 240 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 C11orf42Q8N5U0 333 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 OR4C6Q8NH72 309 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 GAL3ST3Q96A11 431 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 TMEM176AQ96HP8 235 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 FAM193BQ96PV7 902 aaPredicted RBP4.84□□□□□ -1.63
HERC4-205ENST00000412272 PEBP4Q96S96 227 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 LGR4Q9BXB1 951 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 FAM124BQ9H5Z6 455 aaPredicted RBP4.84□□□□□ -1.63
HERC4-205ENST00000412272 TUBA4BQ9H853 241 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 AGO4Q9HCK5 861 aaKnown RBP4.84□□□□□ -1.63
HERC4-205ENST00000412272 ACSS2Q9NR19 701 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 DCAF13Q9NV06 445 aaKnown RBP4.84□□□□□ -1.63
HERC4-205ENST00000412272 HAO2Q9NYQ3 351 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 CALML5Q9NZT1 146 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 A0A1W2PQL4 384 aaPredicted RBP4.84□□□□□ -1.64
HERC4-205ENST00000412272 CPED1A4D0V7 1026 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 ISM1B1AKI9 464 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 TMEM233B4DJY2 109 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 SCDO00767 359 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 UBFD1O14562 309 aaKnown RBP4.84□□□□□ -1.64
HERC4-205ENST00000412272 C1QCP02747 245 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 PRDX5P30044 214 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 PTGER4P35408 488 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 DAPP51397 102 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 OR4D2P58180 307 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 HTRA3P83110 453 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 GAS6Q14393 721 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 GPNMBQ14956 572 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 AGBL4Q5VU57 503 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 TRIQKQ629K1 86 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 XYLT1Q86Y38 959 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 RCBTB1Q8NDN9 531 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 ZNF548Q8NEK5 533 aaPredicted RBP4.84□□□□□ -1.64
HERC4-205ENST00000412272 OR9I1Q8NGQ6 314 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 GGHQ92820 318 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 DNASE1L2Q92874 299 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 HLA-CQ95604 372 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 KIF12Q96FN5 646 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 C12orf66Q96MD2 445 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 CNTNAP3BQ96NU0 1288 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 CNTNAP3Q9BZ76 1288 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 LAT2Q9GZY6 243 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 AKTIPQ9H8T0 292 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 DOK5Q9P104 306 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 PLEKHB1Q9UF11 243 aaPredicted RBP4.84□□□□□ -1.64
HERC4-205ENST00000412272 ACSL6Q9UKU0 697 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 FCF1Q9Y324 198 aaKnown RBP4.84□□□□□ -1.64
HERC4-205ENST00000412272 TNFRSF18Q9Y5U5 241 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 ANKRD36A6QL64 1941 aa4.84□□□□□ -1.64
HERC4-205ENST00000412272 A0A1W2PR48 441 aa4.83□□□□□ -1.64
HERC4-205ENST00000412272 OR5H15A6NDH6 313 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms