RNA–Protein interactions for RNA: ENST00000412256.1

RAB11FIP3-202, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-202ENST00000412256 NUDCD3Q8IVD9 361 aa12.23□□□□□ -0.45
RAB11FIP3-202ENST00000412256 RIBC1Q8N443 379 aaPredicted RBP12.23□□□□□ -0.45
RAB11FIP3-202ENST00000412256 WDR31Q8NA23 367 aa12.23□□□□□ -0.45
RAB11FIP3-202ENST00000412256 MIPOL1Q8TD10 442 aa12.23□□□□□ -0.45
RAB11FIP3-202ENST00000412256 NANOS1Q8WY41 292 aaKnown RBP12.23□□□□□ -0.45
RAB11FIP3-202ENST00000412256 NAA11Q9BSU3 229 aaPredicted RBP12.23□□□□□ -0.45
RAB11FIP3-202ENST00000412256 POLE3Q9NRF9 147 aa12.23□□□□□ -0.45
RAB11FIP3-202ENST00000412256 TRAPPC4Q9Y296 219 aa12.23□□□□□ -0.45
RAB11FIP3-202ENST00000412256 PMF1-BGLAPU3KQ54 211 aa12.23□□□□□ -0.45
RAB11FIP3-202ENST00000412256 A0A096LNT2 108 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 TMED7-TICAM2A0A0A6YYA0 188 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 WDR91A4D1P6 747 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 ELOA3DA6NLF2 546 aaPredicted RBP12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 DNPH1O43598 174 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 LY6HO94772 140 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 CREB1P16220 341 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 CDH2P19022 906 aaPredicted RBP12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 HTR3AP46098 478 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 EFNA4P52798 201 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 SLC16A1P53985 500 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 SLC35A1P78382 337 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 HPCAP84074 193 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 VLDLRP98155 873 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 TGFBR3Q03167 851 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 ELOA3BQ3SY89 546 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 EMBQ6PCB8 327 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 LSRQ86X29 649 aaPredicted RBP12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 FAM71CQ8NEG0 241 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 ELOA3Q8NG57 546 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 OR8J2Q8NGG1 315 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 CNOT9Q92600 299 aaKnown RBP12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 DDIT4LQ96D03 193 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 SAP130Q9H0E3 1048 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 SHARPINQ9H0F6 387 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 SLC7A10Q9NS82 523 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 ASIC5Q9NY37 505 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 MALT1Q9UDY8 824 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 MARCOQ9UEW3 520 aaPredicted RBP12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 TMED7Q9Y3B3 224 aa12.22□□□□□ -0.45
RAB11FIP3-202ENST00000412256 H7C417 338 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 AP3D1O14617 1153 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 ITM2AO43736 263 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 EIF1BO60739 113 aaKnown RBP12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 GUSBP08236 651 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 NUDT17P0C025 328 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 USF1P22415 310 aaPredicted RBP12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 APOBEC3AP31941 199 aaPredicted RBP12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 KHKP50053 298 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 POLR2HP52434 150 aaKnown RBP12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 PRPS1P60891 318 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 PHC1P78364 1004 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 H3F3AP84243 136 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 SMU1Q2TAY7 513 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 TSPO2Q5TGU0 170 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 SAXO2Q658L1 398 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 FRRS1Q6ZNA5 592 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 C10orf105Q8TEF2 133 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 OIT3Q8WWZ8 545 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 PMM1Q92871 262 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 FBXO17Q96EF6 278 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 SLC35A5Q9BS91 424 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 EXOSC3Q9NQT5 275 aaKnown RBP12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 SLC17A5Q9NRA2 495 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 LGALS13Q9UHV8 139 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 OSGIN1Q9UJX0 560 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 SLC9A8Q9Y2E8 581 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 AMDHD2Q9Y303 409 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 FLVCR1Q9Y5Y0 555 aa12.21□□□□□ -0.45
RAB11FIP3-202ENST00000412256 CUBNO60494 3623 aa12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 TMEM72A0PK05 275 aa12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 KLF11O14901 512 aa12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 SCN2BO60939 215 aa12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 KRT33AO76009 404 aa12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 F12P00748 615 aaPredicted RBP12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 MYZAPP0CAP1 466 aa12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 IMPDH2P12268 514 aa12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 TACR3P29371 465 aa12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 S100A3P33764 101 aa12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 LSM11P83369 360 aaKnown RBP eCLIP12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 FUT5Q11128 374 aa12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 CARTPTQ16568 116 aa12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 KLHL24Q6TFL4 600 aa12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 RNF130Q86XS8 419 aa12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 ARIH2OSQ8N7S6 290 aa12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 ZNF781Q8N8C0 355 aa12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 ANKFN1Q8N957 763 aa12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 PROX1Q92786 737 aa12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 NEURL3Q96EH8 262 aa12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 PKNOX2Q96KN3 472 aa12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 ROPN1BQ9BZX4 212 aaPredicted RBP12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 ROPN1Q9HAT0 212 aaPredicted RBP12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 DCTN4Q9UJW0 460 aa12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 MOKQ9UQ07 419 aa12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 HEATR1Q9H583 2144 aaKnown RBP12.2□□□□□ -0.46
RAB11FIP3-202ENST00000412256 PRAMEF27A3QJZ7 478 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 ATP6V1G2-DDX39BF2Z307 99 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 PDLIM1O00151 329 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 HMGN4O00479 90 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 ZNF208O43345 1280 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms