RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 OR2T27Q8NH04 317 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 DPF1Q92782 380 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 ZNF582Q96NG8 517 aaPredicted RBP6.93□□□□□ -1.3
PTPN3-203ENST00000412145 GINS3Q9BRX5 216 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 SFTPDP35247 375 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 NSDHLQ15738 373 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 ASRGL1Q7L266 308 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 LGI3Q8N145 548 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 SLC15A4Q8N697 577 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 TMEM239Q8WW34 195 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 TMEM19Q96HH6 336 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 SCLYQ96I15 445 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 TMEM59Q9BXS4 323 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 BABAM2Q9NXR7 383 aa6.93□□□□□ -1.3
PTPN3-203ENST00000412145 DNMT3BQ9UBC3 853 aaKnown RBP6.93□□□□□ -1.3
PTPN3-203ENST00000412145 TCRBV7S2A1N4TA0A589 114 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 CYC1P08574 325 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 CD53P19397 219 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 SLC35A1P78382 337 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 LTBQ06643 244 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 CDK5R2Q13319 367 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 TMEM135Q86UB9 458 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 SLC22A24Q8N4F4 322 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 SLC35G3Q8N808 338 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 ZNF300Q96RE9 604 aaPredicted RBP6.92□□□□□ -1.3
PTPN3-203ENST00000412145 SLC12A9Q9BXP2 914 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 RIMS4Q9H426 269 aaPredicted RBP6.92□□□□□ -1.3
PTPN3-203ENST00000412145 ACAD8Q9UKU7 415 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 INSL5Q9Y5Q6 135 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 NPFFR2Q9Y5X5 522 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 A0A0U1RQF3 1178 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 H7BYZ3 331 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 PIAS1O75925 651 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 MT-ND4P03905 459 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 CCL5P13501 91 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 CR2P20023 1033 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 PDE7AQ13946 482 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 PLA1AQ53H76 456 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 TMEM107Q6UX40 140 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 BPIFA2Q96DR5 249 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 SIGLEC10Q96LC7 697 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 LHPPQ9H008 270 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 C1orf198Q9H425 327 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 SULT2B1O00204 365 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 OR8U8P0C7N1 319 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 GABRA2P47869 451 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 CD81P60033 236 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 AADACL3Q5VUY0 350 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 TIGD3Q6B0B8 471 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 ADAM5Q6NVV9 412 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 CTU1Q7Z7A3 348 aaKnown RBP6.92□□□□□ -1.3
PTPN3-203ENST00000412145 ADGRE4PQ86SQ3 457 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 CCDC116Q8IYX3 515 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 IL22RA1Q8N6P7 574 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 ZNF587BE7ETH6 402 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 SMAD9O15198 467 aaKnown RBP6.92□□□□□ -1.3
PTPN3-203ENST00000412145 RPL7P18124 248 aaKnown RBP6.92□□□□□ -1.3
PTPN3-203ENST00000412145 MRPS34P82930 218 aaKnown RBP6.92□□□□□ -1.3
PTPN3-203ENST00000412145 CTU2Q2VPK5 515 aaKnown RBP6.92□□□□□ -1.3
PTPN3-203ENST00000412145 SLC35D2Q76EJ3 337 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.92□□□□□ -1.3
PTPN3-203ENST00000412145 OR10K1Q8NGX5 313 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 OR6K3Q8NGY3 331 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 APH1BQ8WW43 257 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 KCNK13Q9HB14 408 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 RAB18Q9NP72 206 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 TM7SF3Q9NS93 570 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 ACOXLQ9NUZ1 547 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 B4GALT6Q9UBX8 382 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 SLC23A2Q9UGH3 650 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 RAB22AQ9UL26 194 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 TRBV23OR9-2A0A075B6M9 112 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 A0A0G2JLL6 359 aaPredicted RBP6.92□□□□□ -1.3
PTPN3-203ENST00000412145 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.92□□□□□ -1.3
PTPN3-203ENST00000412145 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.92□□□□□ -1.3
PTPN3-203ENST00000412145 ETV5P41161 510 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 EMP2P54851 167 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 ADPRHP54922 357 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 INHBCP55103 352 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 COTL1Q14019 142 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 RGNQ15493 299 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 Q499Y3 187 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 YOD1Q5VVQ6 348 aaPredicted RBP6.92□□□□□ -1.3
PTPN3-203ENST00000412145 DESI1Q6ICB0 168 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 PRRT2Q7Z6L0 340 aaPredicted RBP6.92□□□□□ -1.3
PTPN3-203ENST00000412145 ACVR1CQ8NER5 493 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 RHOXF1Q8NHV9 184 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 SLC35E1Q96K37 410 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 ZFYVE21Q9BQ24 234 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 FBRSL1Q9HCM7 1045 aaKnown RBP6.92□□□□□ -1.3
PTPN3-203ENST00000412145 GPR171O14626 319 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 GIPP09681 153 aaPredicted RBP6.92□□□□□ -1.3
PTPN3-203ENST00000412145 ENPP1P22413 925 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 HUS1BQ8NHY5 278 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 ST7LQ8TDW4 575 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 DDX1Q92499 740 aaKnown RBP6.92□□□□□ -1.3
PTPN3-203ENST00000412145 SDSLQ96GA7 329 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 SLC41A2Q96JW4 573 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 SOX7Q9BT81 388 aa6.92□□□□□ -1.3
PTPN3-203ENST00000412145 ALG12Q9BV10 488 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms