RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 RNF6Q9Y252 685 aa13.84□□□□□ -0.19
TRAPPC12-203ENST00000411973 TRAPPC4Q9Y296 219 aa13.84□□□□□ -0.19
TRAPPC12-203ENST00000411973 A0A1W2PNR3 127 aa13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 A8MVM7 634 aa13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 NPIPB7O75200 414 aa13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 GMNNO75496 209 aa13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 PMS2P2O95744 297 aa13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 SERPINA1P01009 418 aa13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 FCGR2AP12318 317 aa13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 CHRNB4P30926 498 aa13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 CSNK2A1P68400 391 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 BNIP2Q12982 314 aa13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 ZNF239Q16600 458 aaKnown RBP13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 ALG10BQ5I7T1 473 aa13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 OR2A2Q6IF42 318 aa13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 PLXDC2Q6UX71 529 aa13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 NAXEQ8NCW5 288 aa13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 SDCCAG3Q96C92 435 aa13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 SLC7A6OSQ96CW6 309 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 SLC47A1Q96FL8 570 aa13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 TPD52L3Q96J77 140 aa13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 SRXN1Q9BYN0 137 aa13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 OR11A1Q9GZK7 315 aa13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 POLR2J2Q9GZM3 115 aaKnown RBP13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 POLR2J3Q9H1A7 115 aaKnown RBP13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 RNF122Q9H9V4 155 aa13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 DCAF13Q9NV06 445 aaKnown RBP13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 RPS6KA6Q9UK32 745 aa13.83□□□□□ -0.2
TRAPPC12-203ENST00000411973 ZC3H12DA2A288 527 aaKnown RBP13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 ELOA3DA6NLF2 546 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 SULT2B1O00204 365 aa13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 ARPC2O15144 300 aa13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 DNPH1O43598 174 aa13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 AQP8O94778 261 aa13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 SYNGR4O95473 234 aa13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 ZNF682O95780 498 aa13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 CRHP06850 196 aa13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 TFPIP10646 304 aa13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 CCNA2P20248 432 aa13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 MSX2P35548 267 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 DIO1P49895 249 aa13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 MYBPHQ13203 477 aa13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 ELOA3BQ3SY89 546 aa13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 DNAL1Q4LDG9 190 aa13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 ENTPD8Q5MY95 495 aa13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 LINC00114Q6XXX2 140 aa13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 P4HA3Q7Z4N8 544 aa13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 VTCN1Q7Z7D3 282 aa13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 CCDC71Q8IV32 467 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 ELOA3Q8NG57 546 aa13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 LILRB4Q8NHJ6 448 aa13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 STK35Q8TDR2 534 aa13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 ADAMTS16Q8TE57 1224 aa13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 SELENONQ9NZV5 590 aa13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 ZNF629Q9UEG4 869 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 SAMD4AQ9UPU9 718 aaKnown RBP13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 SNX13Q9Y5W8 968 aa13.82□□□□□ -0.2
TRAPPC12-203ENST00000411973 A0A087WUJ7 227 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 TRAPPC13A5PLN9 417 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 GYG2O15488 501 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 CHP2O43745 196 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 ATP5HO75947 161 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 LYPD3O95274 346 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 CLDN14O95500 239 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 IL18BPO95998 194 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 TMIGD3P0DMS9 266 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 TNFRSF1BP20333 461 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 CTSSP25774 331 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 OR1E2P47887 323 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 AGFG1P52594 562 aaKnown RBP13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 CDH12P55289 794 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 EGR4Q05215 589 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 TRIM25Q14258 630 aaKnown RBP13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 GUSBP1Q15486 140 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 IFI44LQ53G44 452 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 EEF1A1P5Q5VTE0 462 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 C5orf46Q6UWT4 87 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 TSPYL5Q86VY4 417 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 RNF128Q8TEB7 428 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 GEMIN6Q8WXD5 167 aaKnown RBP13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 INTS12Q96CB8 462 aaKnown RBP13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 HSH2DQ96JZ2 352 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 BTBD10Q9BSF8 475 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 PRRG4Q9BZD6 226 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 MUC13Q9H3R2 512 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 GLRX2Q9NS18 164 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 ACTR3BQ9P1U1 418 aa13.81□□□□□ -0.2
TRAPPC12-203ENST00000411973 UTP20O75691 2785 aaKnown RBP13.8□□□□□ -0.2
TRAPPC12-203ENST00000411973 IGKV1D-42A0A075B6H8 117 aa13.8□□□□□ -0.2
TRAPPC12-203ENST00000411973 CPSF4LA6NMK7 179 aaKnown RBP13.8□□□□□ -0.2
TRAPPC12-203ENST00000411973 OR5F1O95221 314 aa13.8□□□□□ -0.2
TRAPPC12-203ENST00000411973 THY1P04216 161 aa13.8□□□□□ -0.2
TRAPPC12-203ENST00000411973 IMPDH2P12268 514 aa13.8□□□□□ -0.2
TRAPPC12-203ENST00000411973 ENPP1P22413 925 aa13.8□□□□□ -0.2
TRAPPC12-203ENST00000411973 OPRM1P35372 400 aa13.8□□□□□ -0.2
TRAPPC12-203ENST00000411973 IDUAP35475 653 aa13.8□□□□□ -0.2
TRAPPC12-203ENST00000411973 H3F3AP84243 136 aa13.8□□□□□ -0.2
TRAPPC12-203ENST00000411973 FOXF2Q12947 444 aa13.8□□□□□ -0.2
TRAPPC12-203ENST00000411973 CDSNQ15517 529 aa13.8□□□□□ -0.2
TRAPPC12-203ENST00000411973 C1orf140Q5VVS0 124 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms