RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 NUFIP2Q7Z417 695 aaKnown RBP4.09□□□□□ -1.75
LSM5-205ENST00000409952 NUDCD3Q8IVD9 361 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 GPR65Q8IYL9 337 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 CMTM8Q8IZV2 173 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 MTURNQ8N3F0 131 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 TPRX1Q8N7U7 411 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 FNDC5Q8NAU1 212 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 OR2T33Q8NG76 320 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 OR52H1Q8NGJ2 320 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 OR10G7Q8NGN6 311 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 ANGPTL6Q8NI99 470 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 NUDCD2Q8WVJ2 157 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 NAT6Q93015 286 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 C11orf52Q96A22 123 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 ZBED6CLQ96FA7 236 aaPredicted RBP4.09□□□□□ -1.75
LSM5-205ENST00000409952 JSRP1Q96MG2 331 aaPredicted RBP4.09□□□□□ -1.75
LSM5-205ENST00000409952 OR52A5Q9H2C5 316 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 TMEM165Q9HC07 324 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 ELOVL2Q9NXB9 296 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 THYN1Q9P016 225 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 IFNKQ9P0W0 207 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 STX18Q9P2W9 335 aaKnown RBP4.09□□□□□ -1.75
LSM5-205ENST00000409952 TMCO1Q9UM00 188 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 COPS3Q9UNS2 423 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 FLVCR2Q9UPI3 526 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 NTNG1Q9Y2I2 539 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 MMP24Q9Y5R2 645 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 CSNK1G3Q9Y6M4 447 aa4.09□□□□□ -1.75
LSM5-205ENST00000409952 NSG1A0A0A6YYJ2 146 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 A0A0G2JLW4 131 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 TCRBV9S1A1TA0A576 114 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 PLSCR5A0PG75 271 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 LRRIQ3A6PVS8 624 aaPredicted RBP4.08□□□□□ -1.76
LSM5-205ENST00000409952 ZNF99A8MXY4 864 aaPredicted RBP4.08□□□□□ -1.76
LSM5-205ENST00000409952 IDSB3KWA1 339 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 E9PQ18 207 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 M0R3G1 203 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 FCN1O00602 326 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 NDUFAB1O14561 156 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 SIVA1O15304 175 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 AIREO43918 545 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 SCELO95171 688 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 C1orf105O95561 183 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 FGFR1OPO95684 399 aaKnown RBP4.08□□□□□ -1.76
LSM5-205ENST00000409952 TSPAN13O95857 204 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 TPM3P06753 285 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 WNT2P09544 360 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 PRSS56P0CW18 603 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 PRPS2P11908 318 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 SERPINA2P20848 420 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 MARK3P27448 753 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 VHLP40337 213 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 NAA10P41227 235 aaPredicted RBP4.08□□□□□ -1.76
LSM5-205ENST00000409952 NSG1P42857 185 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 CX3CR1P49238 355 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 PSMD4P55036 377 aaKnown RBP4.08□□□□□ -1.76
LSM5-205ENST00000409952 FOXG1P55316 489 aaPredicted RBP4.08□□□□□ -1.76
LSM5-205ENST00000409952 KRTAP10-9P60411 292 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 TNNC1P63316 161 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 GSTO1P78417 241 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 ZNF154Q13106 437 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 FAM189A2Q15884 450 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 UPP1Q16831 310 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 CYP51A1Q16850 503 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 DGUOKQ16854 277 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 ZNF672Q499Z4 452 aaPredicted RBP4.08□□□□□ -1.76
LSM5-205ENST00000409952 CLEC6AQ6EIG7 209 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 FAM199XQ6PEV8 388 aaPredicted RBP4.08□□□□□ -1.76
LSM5-205ENST00000409952 C3P1Q6ZMU1 363 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 HDDC2Q7Z4H3 204 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 CCDC71Q8IV32 467 aaPredicted RBP4.08□□□□□ -1.76
LSM5-205ENST00000409952 JAGN1Q8N5M9 183 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 LINC00469Q8N7U9 141 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 ZNRF1Q8ND25 227 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 FBXO36Q8NEA4 188 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 OR9A4Q8NGU2 314 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 OR52E5Q8NH55 327 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 CCDC12Q8WUD4 166 aaPredicted RBP4.08□□□□□ -1.76
LSM5-205ENST00000409952 CD101Q93033 1021 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 ZBTB9Q96C00 473 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 RAB3CQ96E17 227 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 XPO6Q96QU8 1125 aaKnown RBP4.08□□□□□ -1.76
LSM5-205ENST00000409952 ATP5SQ99766 215 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 NAT10Q9H0A0 1025 aaKnown RBP4.08□□□□□ -1.76
LSM5-205ENST00000409952 PPDPFQ9H3Y8 114 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 LIME1Q9H400 295 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 DDX31Q9H8H2 851 aaKnown RBP4.08□□□□□ -1.76
LSM5-205ENST00000409952 CSNK1G1Q9HCP0 422 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 ZNF71Q9NQZ8 489 aaPredicted RBP4.08□□□□□ -1.76
LSM5-205ENST00000409952 NRBP2Q9NSY0 501 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 DEPPQ9NTK1 212 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 EHFQ9NZC4 300 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 NUDT4Q9NZJ9 180 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 ADAM22Q9P0K1 906 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 PPP1R3CQ9UQK1 317 aa4.08□□□□□ -1.76
LSM5-205ENST00000409952 A0A1B0GUS0 222 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 TMEM120BA0PK00 339 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 BCLAF3A2AJT9 711 aaKnown RBP4.07□□□□□ -1.76
LSM5-205ENST00000409952 SAGE2PA6NJ88 616 aa4.07□□□□□ -1.76
LSM5-205ENST00000409952 A8MUA0 341 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms