RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 MED31Q9Y3C7 131 aa11.75□□□□□ -0.53
LIMS2-203ENST00000409254 SAMHD1Q9Y3Z3 626 aaKnown RBP11.75□□□□□ -0.53
LIMS2-203ENST00000409254 CORINQ9Y5Q5 1042 aa11.75□□□□□ -0.53
LIMS2-203ENST00000409254 PCNX1Q96RV3 2341 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 TRAV36DV7A0A075B6V5 113 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 SH3PXD2BA1X283 911 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 ANKRD65E5RJM6 399 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 J3KTA2 159 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 TNFRSF11BO00300 401 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 GNGT2O14610 69 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 MGRN1O60291 552 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 EIF1BO60739 113 aaKnown RBP11.74□□□□□ -0.53
LIMS2-203ENST00000409254 TIPRLO75663 272 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 AHSA1O95433 338 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 POU3F2P20265 443 aaPredicted RBP11.74□□□□□ -0.53
LIMS2-203ENST00000409254 RBPJQ06330 500 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 ZNF239Q16600 458 aaKnown RBP11.74□□□□□ -0.53
LIMS2-203ENST00000409254 FGD3Q5JSP0 725 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 SHQ1Q6PI26 577 aaKnown RBP11.74□□□□□ -0.53
LIMS2-203ENST00000409254 MBOAT2Q6ZWT7 520 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 RRM2BQ7LG56 351 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 LILRA2Q8N149 483 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 SLC43A2Q8N370 569 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 MEIOBQ8N635 442 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 SCAIQ8N9R8 606 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 ADPRHL1Q8NDY3 354 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 MFSD8Q8NHS3 518 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 CPNE4Q96A23 557 aaPredicted RBP11.74□□□□□ -0.53
LIMS2-203ENST00000409254 MIB2Q96AX9 1013 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 ZNF524Q96C55 264 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 UCN2Q96RP3 112 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 GABARAPL1Q9H0R8 117 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 SLC6A15Q9H2J7 730 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 RASSF4Q9H2L5 321 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 FKRPQ9H9S5 495 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 TIGARQ9NQ88 270 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 NTNG1Q9Y2I2 539 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 TESMINQ9Y4I5 508 aa11.74□□□□□ -0.53
LIMS2-203ENST00000409254 IGKV1D-42A0A075B6H8 117 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 A0A087WUU8 490 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 GMFGO60234 142 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 E2F6O75461 281 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 CELA3AP09093 270 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 GABRA1P14867 456 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 BMP7P18075 431 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 SLC9A3P48764 834 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 CLDN18P56856 261 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 RAC3P60763 192 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 RPS3AP61247 264 aaKnown RBP11.73□□□□□ -0.53
LIMS2-203ENST00000409254 EGR4Q05215 589 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 PRKCDQ05655 676 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 MICAQ29983 383 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 C1orf140Q5VVS0 124 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 ZNF730Q6ZMV8 503 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 WDR88Q6ZMY6 472 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 TMPRSS11FQ6ZWK6 438 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 GGNQ86UU5 652 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 ZDHHC13Q8IUH4 622 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 NKAIN4Q8IVV8 208 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 CDK20Q8IZL9 346 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 ST6GALNAC3Q8NDV1 305 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 OR4K5Q8NGD3 323 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 OR5K1Q8NHB7 308 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 PIGXQ8TBF5 258 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 SDCCAG3Q96C92 435 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 ZHX1-C8orf76Q96EF9 292 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 ADGRG7Q96K78 797 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 ALPK1Q96QP1 1244 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 DGCR6LQ9BY27 220 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 RNPEPL1Q9HAU8 725 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 FANCFQ9NPI8 374 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 ENOPH1Q9UHY7 261 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 ZNF229Q9UJW7 825 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 MGAT4BQ9UQ53 548 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 RPH3AQ9Y2J0 694 aaPredicted RBP11.73□□□□□ -0.53
LIMS2-203ENST00000409254 ZNF337Q9Y3M9 751 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 ZNF175Q9Y473 711 aa11.73□□□□□ -0.53
LIMS2-203ENST00000409254 DIDO1Q9BTC0 2240 aaKnown RBP11.72□□□□□ -0.53
LIMS2-203ENST00000409254 TMEM72A0PK05 275 aa11.72□□□□□ -0.53
LIMS2-203ENST00000409254 TTLL8A6PVC2 850 aa11.72□□□□□ -0.53
LIMS2-203ENST00000409254 NPIPA5E9PKD4 350 aa11.72□□□□□ -0.53
LIMS2-203ENST00000409254 H3BML4 177 aa11.72□□□□□ -0.53
LIMS2-203ENST00000409254 CASQ2O14958 399 aaPredicted RBP11.72□□□□□ -0.53
LIMS2-203ENST00000409254 WDR1O75083 606 aa11.72□□□□□ -0.53
LIMS2-203ENST00000409254 DIRAS1O95057 198 aa11.72□□□□□ -0.53
LIMS2-203ENST00000409254 CCNB2O95067 398 aa11.72□□□□□ -0.53
LIMS2-203ENST00000409254 ADAP00813 363 aa11.72□□□□□ -0.53
LIMS2-203ENST00000409254 FCGR2AP12318 317 aa11.72□□□□□ -0.53
LIMS2-203ENST00000409254 ANXA8P13928 327 aa11.72□□□□□ -0.53
LIMS2-203ENST00000409254 GSTM3P21266 225 aa11.72□□□□□ -0.53
LIMS2-203ENST00000409254 FPR3P25089 353 aa11.72□□□□□ -0.53
LIMS2-203ENST00000409254 IDUAP35475 653 aa11.72□□□□□ -0.53
LIMS2-203ENST00000409254 COX10Q12887 443 aa11.72□□□□□ -0.53
LIMS2-203ENST00000409254 RCN1Q15293 331 aa11.72□□□□□ -0.53
LIMS2-203ENST00000409254 TAF11Q15544 211 aa11.72□□□□□ -0.53
LIMS2-203ENST00000409254 CTU2Q2VPK5 515 aaKnown RBP11.72□□□□□ -0.53
LIMS2-203ENST00000409254 WLSQ5T9L3 541 aa11.72□□□□□ -0.53
LIMS2-203ENST00000409254 ZNF770Q6IQ21 691 aaPredicted RBP11.72□□□□□ -0.53
LIMS2-203ENST00000409254 RPL13AP3Q6NVV1 102 aa11.72□□□□□ -0.53
LIMS2-203ENST00000409254 C1orf94Q6P1W5 598 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms