RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 AMBNQ9NP70 447 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 DYNLRB1Q9NP97 96 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 CBX7O95931 251 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 ICAM1P05362 532 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 CTSAP10619 480 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 PRDX4Q13162 271 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 PDE7AQ13946 482 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 KCNC3Q14003 757 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 CCL15Q16663 113 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 TMEM151AQ8N4L1 468 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 OXER1Q8TDS5 423 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 PNPOQ9NVS9 261 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 PTPRQQ9UMZ3 2332 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 SPINT2O43291 252 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 TSEN54Q7Z6J9 526 aaKnown RBP8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 OR56B1Q8NGI3 324 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 USP6P35125 1406 aa8.09□□□□□ -1.11
CACNA1C-220ENST00000399655 ZCWPW2A0A1B0GU75 182 aa8.09□□□□□ -1.12
CACNA1C-220ENST00000399655 BET1O15155 118 aa8.09□□□□□ -1.12
CACNA1C-220ENST00000399655 ST8SIA5O15466 376 aa8.09□□□□□ -1.12
CACNA1C-220ENST00000399655 HLA-DQB2P05538 268 aa8.09□□□□□ -1.12
CACNA1C-220ENST00000399655 ACP5P13686 325 aa8.09□□□□□ -1.12
CACNA1C-220ENST00000399655 POU4F3Q15319 338 aa8.09□□□□□ -1.12
CACNA1C-220ENST00000399655 ALKBH6Q3KRA9 238 aa8.09□□□□□ -1.12
CACNA1C-220ENST00000399655 GLYATL3Q5SZD4 288 aa8.09□□□□□ -1.12
CACNA1C-220ENST00000399655 OTOP1Q7RTM1 612 aa8.09□□□□□ -1.12
CACNA1C-220ENST00000399655 IGFN1Q86VF2 1251 aa8.09□□□□□ -1.12
CACNA1C-220ENST00000399655 WASHC3Q9Y3C0 194 aa8.09□□□□□ -1.12
CACNA1C-220ENST00000399655 TMEM82A0PJX8 343 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 HTR1EP28566 365 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 OVCH1Q7RTY7 1134 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 MAP4K3Q8IVH8 894 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 SMIM3Q9BZL3 60 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 TRAV18A0A075B6X5 111 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 NME2P22392 152 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 ZNF626Q68DY1 528 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 LILRB1Q8NHL6 650 aaPredicted RBP8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 IGFLR1Q9H665 355 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 ZNF160Q9HCG1 818 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 ADARB2Q9NS39 739 aaKnown RBP8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 FABP7O15540 132 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 ERI3O43414 337 aaKnown RBP8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 LGI1O95970 557 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 SFTPDP35247 375 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 WNT3AP56704 352 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 DSC2Q02487 901 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 SLC22A6Q4U2R8 563 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 CERS5Q8N5B7 392 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 KCTD12Q96CX2 325 aaKnown RBP8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 PPM1HQ9ULR3 514 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 SLC35A3Q9Y2D2 325 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 ZNF814B7Z6K7 855 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 UBE2IP63279 158 aaKnown RBP8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 FRG2Q64ET8 278 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 SIGIRRQ6IA17 410 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 FRG2BQ96QU4 278 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 KCNJ15Q99712 375 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 TMEM98Q9Y2Y6 226 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 GPATCH8Q9UKJ3 1502 aaKnown RBP8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 ZC3H12DA2A288 527 aaKnown RBP8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 GPRIN2O60269 458 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 OAS1P00973 400 aaKnown RBP8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 RFX2P48378 723 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 CNN1P51911 297 aaKnown RBP8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 HLA-BQ31612 363 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 ERMP1Q7Z2K6 904 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 BOD1Q96IK1 185 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 CIB3Q96Q77 187 aaPredicted RBP8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 SYNJ1O43426 1573 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 CD8B2A6NJW9 211 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 CSTAP01040 98 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 CD8BP10966 210 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 SOX18P35713 384 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 SNU13P55769 128 aaKnown RBP8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 CNIH2Q6PI25 160 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 SENP5Q96HI0 755 aaPredicted RBP8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 GPR21Q99679 349 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 THAP7Q9BT49 309 aaPredicted RBP8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 NTN4Q9HB63 628 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 FBXO8Q9NRD0 319 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 GOSR1O95249 250 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 GIFP27352 417 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 DRICH1Q6PGQ1 229 aaPredicted RBP8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 CILP2Q8IUL8 1156 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 EID2Q8N6I1 236 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 PHYHIPLQ96FC7 376 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 ELF4Q99607 663 aaPredicted RBP8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 TAF9BQ9HBM6 251 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 ZNF623O75123 536 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 DDAH2O95865 285 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 EPHX1P07099 455 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 MTNR1AP48039 350 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 FHITP49789 147 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 TROAPQ12815 778 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 FAM214AQ32MH5 1076 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 COX19Q49B96 90 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 PRAP1Q96NZ9 151 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 ERVMER34-1Q9H9K5 563 aa8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 HEYLQ9NQ87 328 aaPredicted RBP8.08□□□□□ -1.12
CACNA1C-220ENST00000399655 CPQQ9Y646 472 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms