RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 ERFP50548 548 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 MYBPHQ13203 477 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 FLOT2Q14254 428 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 SWT1Q5T5J6 900 aaKnown RBP11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 C1orf185Q5T7R7 199 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 RPTNQ6XPR3 784 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 P3H2Q8IVL5 708 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 OFCC1Q8IZS5 231 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 MEIOBQ8N635 442 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 PRR7Q8TB68 274 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 DNAJA4Q8WW22 397 aaPredicted RBP11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 KTI12Q96EK9 354 aaPredicted RBP11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 SLC47A1Q96FL8 570 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 OR5B2Q96R09 309 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ZNF300Q96RE9 604 aaPredicted RBP11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 UCN2Q96RP3 112 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 TP63Q9H3D4 680 aaPredicted RBP11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 MMADHCQ9H3L0 296 aaPredicted RBP11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 SERINC1Q9NRX5 453 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 RHCGQ9UBD6 479 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 RPS6KB2Q9UBS0 482 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 RIMS3Q9UJD0 308 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 MEMO1Q9Y316 297 aa11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 NCOA6Q14686 2063 aaPredicted RBP11.13□□□□□ -0.63
HLA-DQB1-203ENST00000399082 DOCK7Q96N67 2140 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 TCRBV3S1A0A5B6 114 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ELOA3DA6NLF2 546 aaPredicted RBP11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 AQP12BA6NM10 295 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 FIGNL2A6NMB9 653 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 A8MVM7 634 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ZNF814B7Z6K7 855 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 J3QKU1 62 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 FZD7O75084 574 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 AQP8O94778 261 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 TGM6O95932 706 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 GLI4P10075 376 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 GABRA1P14867 456 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 CXCR1P25024 350 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 EIF1AXP47813 144 aaKnown RBP11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 TAS2R41P59536 307 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 CCNIQ14094 377 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ZSCAN26Q16670 478 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ELOA3BQ3SY89 546 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 C4orf17Q53FE4 359 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 NSUN5P2Q63ZY6 315 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 HBMQ6B0K9 141 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 AQP12AQ8IXF9 295 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 C9orf106Q8NAJ2 232 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 PIK3C3Q8NEB9 887 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ELOA3Q8NG57 546 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 FNDC9Q8TBE3 224 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 STK35Q8TDR2 534 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 OSTF1Q92882 214 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 SLCO4A1Q96BD0 722 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 DHRS1Q96LJ7 313 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 TRIB1Q96RU8 372 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 SEPHS2Q99611 448 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 TTYH2Q9BSA4 534 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 POTEKPQ9BYX7 375 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 POLR2J2Q9GZM3 115 aaKnown RBP11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 POLR2J3Q9H1A7 115 aaKnown RBP11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 IL1RAPQ9NPH3 570 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 MEPEQ9NQ76 525 aaPredicted RBP11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ALKBH4Q9NXW9 302 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 TENM4Q6N022 2769 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 MED12LQ86YW9 2145 aa11.12□□□□□ -0.63
HLA-DQB1-203ENST00000399082 MYO7BQ6PIF6 2116 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 MBD3L4A6NDZ8 208 aaPredicted RBP11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 MBD3L3A6NE82 208 aaPredicted RBP11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 MBD3L5A6NJ08 208 aaPredicted RBP11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 CD8B2A6NJW9 211 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 LIPT2A6NK58 231 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 GJE1A6NN92 205 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 FTCDNL1E5RQL4 147 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 E9PLN8 166 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 SMAD9O15198 467 aaKnown RBP11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 RAMP1O60894 148 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 RNF224P0DH78 156 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 TFPIP10646 304 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 PNMTP11086 282 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 SLC7A1P30825 629 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 PTGER4P35408 488 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 CLK1P49759 484 aaKnown RBP11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 DIO1P49895 249 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 MAP2K6P52564 334 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 UGT2B15P54855 530 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 NUP107P57740 925 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ADORA2A-AS1P86434 159 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 LTBQ06643 244 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 PON3Q15166 354 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ZNF239Q16600 458 aaKnown RBP11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 C1orf140Q5VVS0 124 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 B3GNT6Q6ZMB0 384 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 TMPPEQ6ZT21 453 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 PIWIL3Q7Z3Z3 882 aaKnown RBP11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 FJX1Q86VR8 437 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 ZDHHC21Q8IVQ6 265 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 NAXEQ8NCW5 288 aa11.11□□□□□ -0.63
HLA-DQB1-203ENST00000399082 MBD3L2Q8NHZ7 208 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms