RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 RAF1P04049 648 aa2.55□□□□□ -2
CHD9-202ENST00000398510 IL5P05113 134 aa2.55□□□□□ -2
CHD9-202ENST00000398510 CPMP14384 443 aa2.55□□□□□ -2
CHD9-202ENST00000398510 ARSBP15848 533 aa2.55□□□□□ -2
CHD9-202ENST00000398510 PRRX1P54821 245 aa2.55□□□□□ -2
CHD9-202ENST00000398510 HTD2P86397 168 aa2.55□□□□□ -2
CHD9-202ENST00000398510 FAM53BQ14153 422 aa2.55□□□□□ -2
CHD9-202ENST00000398510 GALEQ14376 348 aa2.55□□□□□ -2
CHD9-202ENST00000398510 C15orf59Q2T9L4 293 aaPredicted RBP2.55□□□□□ -2
CHD9-202ENST00000398510 SLC35D3Q5M8T2 416 aa2.55□□□□□ -2
CHD9-202ENST00000398510 GLYATQ6IB77 296 aa2.55□□□□□ -2
CHD9-202ENST00000398510 ESPNLQ6ZVH7 1005 aa2.55□□□□□ -2
CHD9-202ENST00000398510 MRPL10Q7Z7H8 261 aaKnown RBP2.55□□□□□ -2
CHD9-202ENST00000398510 ZNF554Q86TJ5 538 aa2.55□□□□□ -2
CHD9-202ENST00000398510 OR5R1Q8NH85 324 aa2.55□□□□□ -2
CHD9-202ENST00000398510 OR1E3Q8WZA6 343 aa2.55□□□□□ -2
CHD9-202ENST00000398510 TSPAN10Q9H1Z9 355 aaPredicted RBP2.55□□□□□ -2
CHD9-202ENST00000398510 ZNF160Q9HCG1 818 aa2.55□□□□□ -2
CHD9-202ENST00000398510 SMCO4Q9NRQ5 59 aa2.55□□□□□ -2
CHD9-202ENST00000398510 ACTR10Q9NZ32 417 aa2.55□□□□□ -2
CHD9-202ENST00000398510 PCTPQ9UKL6 214 aa2.55□□□□□ -2
CHD9-202ENST00000398510 FCF1Q9Y324 198 aaKnown RBP2.55□□□□□ -2
CHD9-202ENST00000398510 NME7Q9Y5B8 376 aa2.55□□□□□ -2
CHD9-202ENST00000398510 FABP12A6NFH5 140 aa2.54□□□□□ -2
CHD9-202ENST00000398510 ZNF354AO60765 605 aaPredicted RBP2.54□□□□□ -2
CHD9-202ENST00000398510 UBTFL6P0CB48 400 aaPredicted RBP2.54□□□□□ -2
CHD9-202ENST00000398510 ITGB8P26012 769 aa2.54□□□□□ -2
CHD9-202ENST00000398510 RPL13AP40429 203 aaKnown RBP2.54□□□□□ -2
CHD9-202ENST00000398510 GCGRP47871 477 aa2.54□□□□□ -2
CHD9-202ENST00000398510 ALDH3B2P48448 385 aa2.54□□□□□ -2
CHD9-202ENST00000398510 MNX1P50219 401 aaPredicted RBP2.54□□□□□ -2
CHD9-202ENST00000398510 SLC25A11Q02978 314 aaKnown RBP2.54□□□□□ -2
CHD9-202ENST00000398510 DPTQ07507 201 aa2.54□□□□□ -2
CHD9-202ENST00000398510 GLYR1Q49A26 553 aaPredicted RBP2.54□□□□□ -2
CHD9-202ENST00000398510 NCEH1Q6PIU2 408 aa2.54□□□□□ -2
CHD9-202ENST00000398510 ZNF574Q6ZN55 896 aaPredicted RBP2.54□□□□□ -2
CHD9-202ENST00000398510 NAA40Q86UY6 237 aa2.54□□□□□ -2
CHD9-202ENST00000398510 TSPYL5Q86VY4 417 aaPredicted RBP2.54□□□□□ -2
CHD9-202ENST00000398510 LRRC28Q86X40 367 aaPredicted RBP2.54□□□□□ -2
CHD9-202ENST00000398510 LRRC56Q8IYG6 542 aaPredicted RBP2.54□□□□□ -2
CHD9-202ENST00000398510 MORN4Q8NDC4 146 aa2.54□□□□□ -2
CHD9-202ENST00000398510 GPR148Q8TDV2 347 aa2.54□□□□□ -2
CHD9-202ENST00000398510 BRI3BPQ8WY22 251 aa2.54□□□□□ -2
CHD9-202ENST00000398510 C10orf35Q96D05 121 aa2.54□□□□□ -2
CHD9-202ENST00000398510 SLC12A9Q9BXP2 914 aa2.54□□□□□ -2
CHD9-202ENST00000398510 PROCRQ9UNN8 238 aa2.54□□□□□ -2
CHD9-202ENST00000398510 NOSIPQ9Y314 301 aaKnown RBP2.54□□□□□ -2
CHD9-202ENST00000398510 IGLV3-22A0A075B6J6 115 aa2.54□□□□□ -2
CHD9-202ENST00000398510 CCDC163A0A0D9SF12 145 aa2.54□□□□□ -2
CHD9-202ENST00000398510 ZNF99A8MXY4 864 aaPredicted RBP2.54□□□□□ -2
CHD9-202ENST00000398510 H7BYZ3 331 aa2.54□□□□□ -2
CHD9-202ENST00000398510 DNPH1O43598 174 aa2.54□□□□□ -2
CHD9-202ENST00000398510 DOK2O60496 412 aa2.54□□□□□ -2
CHD9-202ENST00000398510 TSPAN15O95858 294 aa2.54□□□□□ -2
CHD9-202ENST00000398510 HLA-DQB2P05538 268 aa2.54□□□□□ -2
CHD9-202ENST00000398510 CSF3P09919 207 aa2.54□□□□□ -2
CHD9-202ENST00000398510 HIST1H1BP16401 226 aaKnown RBP2.54□□□□□ -2
CHD9-202ENST00000398510 ZNF182P17025 639 aaPredicted RBP2.54□□□□□ -2
CHD9-202ENST00000398510 CALCRP30988 508 aa2.54□□□□□ -2
CHD9-202ENST00000398510 MAP2K3P46734 347 aa2.54□□□□□ -2
CHD9-202ENST00000398510 GDF10P55107 478 aa2.54□□□□□ -2
CHD9-202ENST00000398510 SCAND1P57086 179 aa2.54□□□□□ -2
CHD9-202ENST00000398510 OR2B6P58173 313 aa2.54□□□□□ -2
CHD9-202ENST00000398510 TAS2R45P59539 299 aa2.54□□□□□ -2
CHD9-202ENST00000398510 RPL7AP62424 266 aaKnown RBP2.54□□□□□ -2
CHD9-202ENST00000398510 SLC35B1P78383 322 aa2.54□□□□□ -2
CHD9-202ENST00000398510 KEAP1Q14145 624 aa2.54□□□□□ -2
CHD9-202ENST00000398510 RBMS2Q15434 407 aaKnown RBP2.54□□□□□ -2
CHD9-202ENST00000398510 NEDD8Q15843 81 aa2.54□□□□□ -2
CHD9-202ENST00000398510 HBMQ6B0K9 141 aa2.54□□□□□ -2
CHD9-202ENST00000398510 ZNF613Q6PF04 617 aa2.54□□□□□ -2
CHD9-202ENST00000398510 LHFPL2Q6ZUX7 228 aa2.54□□□□□ -2
CHD9-202ENST00000398510 ERMP1Q7Z2K6 904 aa2.54□□□□□ -2
CHD9-202ENST00000398510 ZNF781Q8N8C0 355 aa2.54□□□□□ -2
CHD9-202ENST00000398510 AQP11Q8NBQ7 271 aa2.54□□□□□ -2
CHD9-202ENST00000398510 OR8J2Q8NGG1 315 aa2.54□□□□□ -2
CHD9-202ENST00000398510 LRTOMTQ8WZ04 291 aa2.54□□□□□ -2
CHD9-202ENST00000398510 MRGPRX1Q96LB2 322 aa2.54□□□□□ -2
CHD9-202ENST00000398510 INTS14Q96SY0 518 aa2.54□□□□□ -2
CHD9-202ENST00000398510 NKX6-2Q9C056 277 aaPredicted RBP2.54□□□□□ -2
CHD9-202ENST00000398510 ZNF350Q9GZX5 532 aa2.54□□□□□ -2
CHD9-202ENST00000398510 LHPPQ9H008 270 aa2.54□□□□□ -2
CHD9-202ENST00000398510 WDR54Q9H977 334 aa2.54□□□□□ -2
CHD9-202ENST00000398510 GJB4Q9NTQ9 266 aa2.54□□□□□ -2
CHD9-202ENST00000398510 INTS6Q9UL03 887 aaKnown RBP2.54□□□□□ -2
CHD9-202ENST00000398510 HHLA2Q9UM44 414 aa2.54□□□□□ -2
CHD9-202ENST00000398510 SLC5A6Q9Y289 635 aa2.54□□□□□ -2
CHD9-202ENST00000398510 FAM170BA6NMN3 283 aa2.54□□□□□ -2
CHD9-202ENST00000398510 AGAP14A8MT82 685 aa2.54□□□□□ -2
CHD9-202ENST00000398510 TSTD3H0UI37 97 aa2.54□□□□□ -2
CHD9-202ENST00000398510 PSMD9O00233 223 aa2.54□□□□□ -2
CHD9-202ENST00000398510 PEX11AO75192 247 aa2.54□□□□□ -2
CHD9-202ENST00000398510 DFFBO76075 338 aa2.54□□□□□ -2
CHD9-202ENST00000398510 CRYAAP02489 173 aa2.54□□□□□ -2
CHD9-202ENST00000398510 CA3P07451 260 aa2.54□□□□□ -2
CHD9-202ENST00000398510 HOXC4P09017 264 aaPredicted RBP2.54□□□□□ -2
CHD9-202ENST00000398510 SPARCP09486 303 aa2.54□□□□□ -2
CHD9-202ENST00000398510 ANKRD34CP0C6C1 535 aa2.54□□□□□ -2
CHD9-202ENST00000398510 C21orf33P30042 268 aaPredicted RBP2.54□□□□□ -2
CHD9-202ENST00000398510 CAPZBP47756 277 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms