RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 SBK2P0C263 348 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ZNF250P15622 560 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ZNF19P17023 458 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 HCCSP53701 268 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 OR12D2P58182 307 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ARHGEF39Q8N4T4 335 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 METTL27Q8N6F8 245 aaPredicted RBP16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 LINC00469Q8N7U9 141 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 C19orf47Q8N9M1 422 aaKnown RBP16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 C17orf47Q8NEP4 570 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 UBASH3BQ8TF42 649 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 MARVELD3Q96A59 401 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 C4orf36Q96KX1 117 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 LRRN3Q9H3W5 708 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ADGRL4Q9HBW9 690 aa16.89■□□□□ 0.29
CHRFAM7A-202ENST00000397827 FHL1Q13642 323 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ZNHIT3Q15649 155 aaPredicted RBP16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 LCN1P1Q5VSP4 162 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 TRIQKQ629K1 86 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 IL20RBQ6UXL0 311 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 SLC44A3Q8N4M1 653 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 RFLNBQ8N5W9 214 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 FAM160A2Q8N612 972 aaPredicted RBP16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 GALNT11Q8NCW6 608 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 RCBTB1Q8NDN9 531 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 OR51L1Q8NGJ5 315 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 RLN3Q8WXF3 142 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 C8orf33Q9H7E9 229 aaPredicted RBP16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 MCCC2Q9HCC0 563 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ZC4H2Q9NQZ6 224 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 HEATR5AQ86XA9 2040 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 A0A0B4J293 547 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 MAGEB4O15481 346 aaPredicted RBP16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ACVR1BP36896 505 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 BDH1Q02338 343 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 KIAA0895LQ68EN5 471 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 NPSR1Q6W5P4 371 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 SSX6Q7RTT6 188 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 PLCZ1Q86YW0 608 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ARL14Q8N4G2 192 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 C19orf18Q8NEA5 215 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ENKURQ8TC29 256 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 SMPDL3BQ92485 455 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 RNF31Q96EP0 1072 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 MSANTD3Q96H12 275 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 SMAD5Q99717 465 aaKnown RBP16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 NDC1Q9BTX1 674 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 POLE3Q9NRF9 147 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 C2orf42Q9NWW7 574 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 CLCA3PQ9Y6N3 262 aa16.88■□□□□ 0.29
CHRFAM7A-202ENST00000397827 OR2B3O76000 313 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ZNF3P17036 446 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ELK1P19419 428 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 PGDP52209 483 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ZNF85Q03923 595 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 CLVS2Q5SYC1 327 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 SHEQ5VZ18 495 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 KIRREL2Q6UWL6 708 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 RDH10Q8IZV5 341 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 GHDCQ8N2G8 530 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 LRRC17Q8N6Y2 441 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 SDR9C7Q8NEX9 313 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 HOXB13Q92826 284 aaPredicted RBP16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 VSTM2LQ96N03 204 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 LMF2Q9BU23 707 aaKnown RBP16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ZNF426Q9BUY5 554 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ERVMER34-1Q9H9K5 563 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 BET1O15155 118 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 FOXS1O43638 330 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 MT-ND5P03915 603 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 GAAP10253 952 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 MAOAP21397 527 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 SLC2A5P22732 501 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 TALDO1P37837 337 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 OR10A3P58181 314 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 MZT2AQ6P582 158 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 RTL4Q6ZR62 310 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 OR4K13Q8NH42 304 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 ERMAPQ96PL5 475 aaPredicted RBP16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 MAP3K3Q99759 626 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 LRIT1Q9P2V4 623 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 FBXL21Q9UKT6 434 aa16.87■□□□□ 0.29
CHRFAM7A-202ENST00000397827 COL4A2P08572 1712 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 A0A1B0GVC2 190 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 A6NIN4 97 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 C2CD4DB7Z1M9 353 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 PEPDP12955 493 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 MYL9P24844 172 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 PARGQ86W56 976 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 YIPF7Q8N8F6 280 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 OR52E2Q8NGJ4 325 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 PMM1Q92871 262 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 LRRC61Q9BV99 259 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 B3GNT2Q9NY97 397 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 CACNA1IQ9P0X4 2223 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 SERPINI2O75830 405 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 HK1P19367 917 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 PPM1FP49593 454 aaPredicted RBP16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 MFSD13AQ14CX5 517 aa16.86■□□□□ 0.29
CHRFAM7A-202ENST00000397827 GXYLT1Q4G148 440 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms