RNA–Protein interactions for RNA: ENST00000397345.7

NEB-203, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-203ENST00000397345 B4DEV8 164 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 HLA-DMAP28067 261 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 RAB28P51157 221 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 DUSP4Q13115 394 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 OR1J4Q8NGS1 313 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 CPNE4Q96A23 557 aaPredicted RBP2.38□□□□□ -2.03
NEB-203ENST00000397345 PRAP1Q96NZ9 151 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 PDLIM7Q9NR12 457 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 SEMA4GQ9NTN9 838 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 MTCH2Q9Y6C9 303 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 CRYBA1P05813 215 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 PTHLHP12272 177 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 TLE4Q04727 773 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 ZNF239Q16600 458 aaKnown RBP2.38□□□□□ -2.03
NEB-203ENST00000397345 DEFB128Q7Z7B8 93 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 ZDHHC1Q8WTX9 485 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 SLC38A1Q9H2H9 487 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 OAZ3Q9UMX2 235 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 A0A0B4J2A0 478 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 PNLIPRP3Q17RR3 467 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 ANKRD16Q6P6B7 361 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 EIF4E3Q8N5X7 224 aaKnown RBP2.38□□□□□ -2.03
NEB-203ENST00000397345 F2RL3Q96RI0 385 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 NLE1Q9NVX2 485 aaPredicted RBP2.38□□□□□ -2.03
NEB-203ENST00000397345 B3GNT2Q9NY97 397 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 SHPKQ9UHJ6 478 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 POLDIP2Q9Y2S7 368 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 ZNF175Q9Y473 711 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 COL2A1P02458 1487 aaPredicted RBP2.38□□□□□ -2.03
NEB-203ENST00000397345 ZNF821O75541 412 aaPredicted RBP2.38□□□□□ -2.03
NEB-203ENST00000397345 PNLIPP16233 465 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 MAOAP21397 527 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 ITGB8P26012 769 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 CALCRP30988 508 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 CCL23P55773 120 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 ANTXR2P58335 489 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 CST9LP1Q5W188 147 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 FUT10Q6P4F1 479 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 HDGFL3Q9Y3E1 203 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 TMEM150BA6NC51 233 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 FAM74A7A6NL05 159 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 ZNF726A6NNF4 738 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 GALR3O60755 368 aaPredicted RBP2.38□□□□□ -2.03
NEB-203ENST00000397345 ACAA1P09110 424 aaPredicted RBP2.38□□□□□ -2.03
NEB-203ENST00000397345 RPS14P62263 151 aaKnown RBP2.38□□□□□ -2.03
NEB-203ENST00000397345 MSMO1Q15800 293 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 MIIPQ5JXC2 388 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 TRAT1Q6PIZ9 186 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 PRSS55Q6UWB4 352 aaPredicted RBP2.38□□□□□ -2.03
NEB-203ENST00000397345 REC114Q7Z4M0 266 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 DMRTC2Q8IXT2 367 aaPredicted RBP2.38□□□□□ -2.03
NEB-203ENST00000397345 DEFB106AQ8N104 65 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 NUDT10Q8NFP7 164 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 SEMA6DQ8NFY4 1073 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 CNIH3Q8TBE1 160 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 SFT2D1Q8WV19 159 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 UBE2ZQ9H832 354 aaPredicted RBP2.38□□□□□ -2.03
NEB-203ENST00000397345 LTB4R2Q9NPC1 389 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 ZDHHC18Q9NUE0 388 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 MYEF2Q9P2K5 600 aaKnown RBP2.38□□□□□ -2.03
NEB-203ENST00000397345 ZDHHC8Q9ULC8 765 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 PBRM1Q86U86 1689 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 TMEM129A0AVI4 362 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 ZNF749O43361 778 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 RAD51DO75771 328 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 ADH4P08319 380 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 GABRB3P28472 473 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 HTR5AP47898 357 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 RBM11P57052 281 aaKnown RBP2.38□□□□□ -2.03
NEB-203ENST00000397345 OR5I1Q13606 314 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 SCARB2Q14108 478 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 BAK1Q16611 211 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 SLC5A12Q1EHB4 618 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 NRROSQ86YC3 692 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 ZNF583Q96ND8 569 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 NICN1Q9BSH3 213 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 CYSLTR2Q9NS75 346 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 NOCTQ9UK39 431 aaKnown RBP2.38□□□□□ -2.03
NEB-203ENST00000397345 SDK2Q58EX2 2172 aa2.38□□□□□ -2.03
NEB-203ENST00000397345 LOC102723532A0A0G2JNH3 316 aa2.37□□□□□ -2.03
NEB-203ENST00000397345 M0QZK8 103 aa2.37□□□□□ -2.03
NEB-203ENST00000397345 CIDEAO60543 219 aa2.37□□□□□ -2.03
NEB-203ENST00000397345 GGCTO75223 188 aaKnown RBP2.37□□□□□ -2.03
NEB-203ENST00000397345 SERPIND1P05546 499 aa2.37□□□□□ -2.03
NEB-203ENST00000397345 FCN2Q15485 313 aa2.37□□□□□ -2.03
NEB-203ENST00000397345 LINC00596Q86U02 117 aa2.37□□□□□ -2.03
NEB-203ENST00000397345 LYSMD2Q8IV50 215 aa2.37□□□□□ -2.03
NEB-203ENST00000397345 GTPBP8Q8N3Z3 284 aaPredicted RBP2.37□□□□□ -2.03
NEB-203ENST00000397345 TMEM143Q96AN5 459 aa2.37□□□□□ -2.03
NEB-203ENST00000397345 ESAMQ96AP7 390 aa2.37□□□□□ -2.03
NEB-203ENST00000397345 PYCR2Q96C36 320 aa2.37□□□□□ -2.03
NEB-203ENST00000397345 OR51B5Q9H339 312 aa2.37□□□□□ -2.03
NEB-203ENST00000397345 PTRH2Q9Y3E5 179 aaKnown RBP2.37□□□□□ -2.03
NEB-203ENST00000397345 AGAP5A6NIR3 686 aa2.37□□□□□ -2.03
NEB-203ENST00000397345 PTSQ03393 145 aa2.37□□□□□ -2.03
NEB-203ENST00000397345 TCEAL6Q6IPX3 200 aa2.37□□□□□ -2.03
NEB-203ENST00000397345 FIGLAQ6QHK4 219 aa2.37□□□□□ -2.03
NEB-203ENST00000397345 GLYATL1Q969I3 302 aa2.37□□□□□ -2.03
NEB-203ENST00000397345 SPSB1Q96BD6 273 aa2.37□□□□□ -2.03
NEB-203ENST00000397345 TCEAL4Q96EI5 215 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms