RNA–Protein interactions for RNA: ENST00000397238.6

AGAP3-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-202ENST00000397238 TMEM138Q9NPI0 162 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 ADAM29Q9UKF5 820 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 TSPAN11A1L157 253 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 TRAPPC13A5PLN9 417 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 BET1O15155 118 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 RP2O75695 350 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 RCBTB2O95199 551 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 RPN2P04844 631 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 ASGR2P07307 311 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 ZNF3P17036 446 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 SOX2P48431 317 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 ZNF273Q14593 569 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 ODF4Q2M2E3 257 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 MTSS1LQ765P7 747 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 TMEFF1Q8IYR6 380 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 LNX2Q8N448 690 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 OR52H1Q8NGJ2 320 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 SFXN5Q8TD22 340 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 BRIX1Q8TDN6 353 aaKnown RBP18.3■□□□□ 0.52
AGAP3-202ENST00000397238 CXorf40AQ8TE69 158 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 ZDHHC1Q8WTX9 485 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 MARC2Q969Z3 335 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 LRIG1Q96JA1 1093 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 ANKRD19PQ9H560 264 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 MTHFD2LQ9H903 347 aaPredicted RBP18.3■□□□□ 0.52
AGAP3-202ENST00000397238 KLHL9Q9P2J3 617 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 HRH3Q9Y5N1 445 aa18.3■□□□□ 0.52
AGAP3-202ENST00000397238 SUSD5O60279 629 aa18.29■□□□□ 0.52
AGAP3-202ENST00000397238 FGF18O76093 207 aa18.29■□□□□ 0.52
AGAP3-202ENST00000397238 NT5EP21589 574 aa18.29■□□□□ 0.52
AGAP3-202ENST00000397238 TPMTP51580 245 aa18.29■□□□□ 0.52
AGAP3-202ENST00000397238 ZNF136P52737 540 aa18.29■□□□□ 0.52
AGAP3-202ENST00000397238 TRAM1Q15629 374 aa18.29■□□□□ 0.52
AGAP3-202ENST00000397238 ZNF454Q8N9F8 522 aa18.29■□□□□ 0.52
AGAP3-202ENST00000397238 DNAAF1Q8NEP3 725 aa18.29■□□□□ 0.52
AGAP3-202ENST00000397238 SYNPRQ8TBG9 265 aa18.29■□□□□ 0.52
AGAP3-202ENST00000397238 VWCEQ96DN2 955 aa18.29■□□□□ 0.52
AGAP3-202ENST00000397238 NARS2Q96I59 477 aaKnown RBP18.29■□□□□ 0.52
AGAP3-202ENST00000397238 SAV1Q9H4B6 383 aaPredicted RBP18.29■□□□□ 0.52
AGAP3-202ENST00000397238 GPR160Q9UJ42 338 aa18.29■□□□□ 0.52
AGAP3-202ENST00000397238 STK11Q15831 433 aa18.29■□□□□ 0.52
AGAP3-202ENST00000397238 C2orf68Q2NKX9 166 aa18.29■□□□□ 0.52
AGAP3-202ENST00000397238 TRMT12Q53H54 448 aaKnown RBP18.29■□□□□ 0.52
AGAP3-202ENST00000397238 LINC00615Q96LM1 132 aaPredicted RBP18.29■□□□□ 0.52
AGAP3-202ENST00000397238 PTCHD1Q96NR3 888 aa18.29■□□□□ 0.52
AGAP3-202ENST00000397238 SHARPINQ9H0F6 387 aa18.29■□□□□ 0.52
AGAP3-202ENST00000397238 ST6GALNAC2Q9UJ37 374 aa18.29■□□□□ 0.52
AGAP3-202ENST00000397238 SC5DO75845 299 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 PCDH8O95206 1070 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 GNRH1P01148 92 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 UBE2NLQ5JXB2 153 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 C7orf50Q9BRJ6 194 aaKnown RBP18.28■□□□□ 0.52
AGAP3-202ENST00000397238 PCBD2Q9H0N5 130 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 APOBEC3BQ9UH17 382 aaKnown RBP18.28■□□□□ 0.52
AGAP3-202ENST00000397238 SLC35A3Q9Y2D2 325 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 NPTNQ9Y639 398 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 ZNF860A6NHJ4 632 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 TGM6O95932 706 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 PRNPP04156 253 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 SRMP19623 302 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 S100A11P31949 105 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 RAG2P55895 527 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 SIRPAP78324 504 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 LRFN4Q6PJG9 635 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 TMUB2Q71RG4 321 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 HDDC3Q8N4P3 179 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 OR8K3Q8NH51 312 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 NR4A3Q92570 626 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 MED31Q9Y3C7 131 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 PCDHGA9Q9Y5G4 932 aaKnown RBP18.28■□□□□ 0.52
AGAP3-202ENST00000397238 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 VEGFDO43915 354 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 SERPINA3P01011 423 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 TMIGD3P0DMS9 266 aaPredicted RBP18.28■□□□□ 0.52
AGAP3-202ENST00000397238 GLDNQ6ZMI3 551 aaPredicted RBP18.28■□□□□ 0.52
AGAP3-202ENST00000397238 GIMAP5Q96F15 307 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 GAL3ST1Q99999 423 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 MENTQ9BUN1 341 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 IFT46Q9NQC8 304 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 NPDC1Q9NQX5 325 aaPredicted RBP18.28■□□□□ 0.52
AGAP3-202ENST00000397238 SPHK1Q9NYA1 384 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 KNL1Q8NG31 2342 aa18.28■□□□□ 0.52
AGAP3-202ENST00000397238 OR6C74A6NCV1 312 aa18.27■□□□□ 0.52
AGAP3-202ENST00000397238 IGLON5A6NGN9 336 aa18.27■□□□□ 0.52
AGAP3-202ENST00000397238 DNAJB6O75190 326 aa18.27■□□□□ 0.52
AGAP3-202ENST00000397238 IGF2P01344 180 aa18.27■□□□□ 0.52
AGAP3-202ENST00000397238 ZNF35P13682 527 aa18.27■□□□□ 0.52
AGAP3-202ENST00000397238 TRA2BP62995 288 aaKnown RBP18.27■□□□□ 0.52
AGAP3-202ENST00000397238 FAM69AQ5T7M9 428 aa18.27■□□□□ 0.52
AGAP3-202ENST00000397238 PLPP4Q5VZY2 271 aa18.27■□□□□ 0.52
AGAP3-202ENST00000397238 MFSD12Q6NUT3 480 aa18.27■□□□□ 0.52
AGAP3-202ENST00000397238 JAM3Q9BX67 310 aa18.27■□□□□ 0.52
AGAP3-202ENST00000397238 SIGLEC7Q9Y286 467 aa18.27■□□□□ 0.52
AGAP3-202ENST00000397238 RNF215Q9Y6U7 377 aa18.27■□□□□ 0.52
AGAP3-202ENST00000397238 SNRNP200O75643 2136 aaKnown RBP18.27■□□□□ 0.52
AGAP3-202ENST00000397238 DOCK9Q9BZ29 2069 aa18.27■□□□□ 0.52
AGAP3-202ENST00000397238 TRBV23OR9-2A0A075B6M9 112 aa18.27■□□□□ 0.52
AGAP3-202ENST00000397238 PRRT4C9JH25 899 aa18.27■□□□□ 0.52
AGAP3-202ENST00000397238 PYCARD-AS1I3L0S3 204 aa18.27■□□□□ 0.52
AGAP3-202ENST00000397238 LAG3P18627 525 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms