RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 FTMTQ8N4E7 242 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 BPIFA2Q96DR5 249 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 UTP23Q9BRU9 249 aaKnown RBP12.28□□□□□ -0.44
TRIM40-207ENST00000396581 IFT27Q9BW83 186 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 REG4Q9BYZ8 158 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 WDR26Q9H7D7 661 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 AUNIPQ9H7T9 357 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 HRASLSQ9HDD0 168 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 BRD7Q9NPI1 651 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 AKAP7Q9P0M2 348 aaPredicted RBP12.28□□□□□ -0.44
TRIM40-207ENST00000396581 CD207Q9UJ71 328 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 ICAM5Q9UMF0 924 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 A0A1W2PRG6 482 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 PLSCR5A0PG75 271 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 RIIAD1A6NNX1 92 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 GMDSO60547 372 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 ECDO95905 644 aaPredicted RBP12.28□□□□□ -0.44
TRIM40-207ENST00000396581 ATP1B1P05026 303 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 DBIP07108 87 aaKnown RBP12.28□□□□□ -0.44
TRIM40-207ENST00000396581 ZNF3P17036 446 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 PSMB1P20618 241 aaKnown RBP12.28□□□□□ -0.44
TRIM40-207ENST00000396581 C4BPBP20851 252 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 PTNP21246 168 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 C5AR1P21730 350 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 WASP42768 502 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 GAS6Q14393 721 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 ZNF267Q14586 743 aaPredicted RBP12.28□□□□□ -0.44
TRIM40-207ENST00000396581 SUZ12Q15022 739 aaKnown RBP12.28□□□□□ -0.44
TRIM40-207ENST00000396581 C2orf27AQ580R0 203 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 PXDC1Q5TGL8 231 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 FAM199XQ6PEV8 388 aaPredicted RBP12.28□□□□□ -0.44
TRIM40-207ENST00000396581 Q6ZTK2 550 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 ESPNLQ6ZVH7 1005 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 PRSS45Q7RTY3 260 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 SAMD14Q8IZD0 417 aaPredicted RBP12.28□□□□□ -0.44
TRIM40-207ENST00000396581 CMTM4Q8IZR5 234 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 GALNT11Q8NCW6 608 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 OR13C2Q8NGS9 318 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 RPS4Y2Q8TD47 263 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 PELI1Q96FA3 418 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 LRFN5Q96NI6 719 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 TMPRSS13Q9BYE2 586 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 SPRTNQ9H040 489 aaPredicted RBP12.28□□□□□ -0.44
TRIM40-207ENST00000396581 LIN7BQ9HAP6 207 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 NRIP3Q9NQ35 241 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 MEPEQ9NQ76 525 aaPredicted RBP12.28□□□□□ -0.44
TRIM40-207ENST00000396581 ZNF224Q9NZL3 707 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 PIPOXQ9P0Z9 390 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 SERTAD3Q9UJW9 196 aa12.28□□□□□ -0.44
TRIM40-207ENST00000396581 MRPS7Q9Y2R9 242 aaKnown RBP12.28□□□□□ -0.44
TRIM40-207ENST00000396581 GABARAPH6UMI1 98 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 MID1O15344 667 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 ADH1BP00325 375 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 ZP3P21754 424 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 DRD5P21918 477 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 GDI2P50395 445 aaKnown RBP12.27□□□□□ -0.45
TRIM40-207ENST00000396581 ACTA2P62736 377 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 ACTG2P63267 376 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 DBPQ10586 325 aaPredicted RBP12.27□□□□□ -0.45
TRIM40-207ENST00000396581 FHL1Q13642 323 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 COL9A2Q14055 689 aaPredicted RBP12.27□□□□□ -0.45
TRIM40-207ENST00000396581 GGTLC2Q14390 218 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 OPCMLQ14982 345 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 AMZ1Q400G9 498 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 RNASE12Q5GAN4 147 aaKnown RBP12.27□□□□□ -0.45
TRIM40-207ENST00000396581 MRPL2Q5T653 305 aaKnown RBP12.27□□□□□ -0.45
TRIM40-207ENST00000396581 AGBL4Q5VU57 503 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 OLFML2AQ68BL7 652 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 KCTD20Q7Z5Y7 419 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 GRAMD2AQ8IUY3 354 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 CDK20Q8IZL9 346 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 OR6V1Q8N148 313 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 OR52E1Q8NGJ3 308 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 OR4C6Q8NH72 309 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 LGALS14Q8TCE9 139 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 GAL3ST3Q96A11 431 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 GABRG3Q99928 467 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 ORAI3Q9BRQ5 295 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 RBCK1Q9BYM8 510 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 PPA2Q9H2U2 334 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 PRDM9Q9NQV7 894 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 ANKRD10Q9NXR5 420 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 KCNE5Q9UJ90 142 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 FBXL4Q9UKA2 621 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 CLEC4AQ9UMR7 237 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 MED31Q9Y3C7 131 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 KCNMB2Q9Y691 235 aa12.27□□□□□ -0.45
TRIM40-207ENST00000396581 hCG_1807616A0A1W2PRN6 198 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 TFP02787 698 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 GIPP09681 153 aaPredicted RBP12.26□□□□□ -0.45
TRIM40-207ENST00000396581 OR2T7P0C7T2 308 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 IGFBP4P22692 258 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 NTSR1P30989 418 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 GBX2P52951 348 aaPredicted RBP12.26□□□□□ -0.45
TRIM40-207ENST00000396581 TNFRSF17Q02223 184 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 TMEM255AQ5JRV8 349 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 TCTE1Q5JU00 501 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 SYT9Q86SS6 491 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 OR2T27Q8NH04 317 aa12.26□□□□□ -0.45
TRIM40-207ENST00000396581 ARPC5LQ9BPX5 153 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms