RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 COQ5Q5HYK3 327 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 C1orf220Q5T0J3 134 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 PRAMEF17Q5VTA0 474 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 TYW3Q6IPR3 259 aaKnown RBP4.31□□□□□ -1.72
GABPB1-204ENST00000396464 BTNL3Q6UXE8 466 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 TMPRSS11AQ6ZMR5 421 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 SLC16A12Q6ZSM3 486 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 Q6ZSV7 163 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 USP50Q70EL3 339 aaPredicted RBP4.31□□□□□ -1.72
GABPB1-204ENST00000396464 ASCL5Q7RTU5 278 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 PIWIL4Q7Z3Z4 852 aaKnown RBP4.31□□□□□ -1.72
GABPB1-204ENST00000396464 HSD11B1LQ7Z5J1 315 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 AMIGO2Q86SJ2 522 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 PNLDC1Q8NA58 520 aaKnown RBP4.31□□□□□ -1.72
GABPB1-204ENST00000396464 OR7A2PQ8NGA2 310 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 C8orf46Q8TAG6 207 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 MAGEC3Q8TD91 643 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 GPR151Q8TDV0 419 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 SMAP2Q8WU79 429 aaPredicted RBP4.31□□□□□ -1.72
GABPB1-204ENST00000396464 MYDGFQ969H8 173 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 ISOC2Q96AB3 205 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 APH1AQ96BI3 265 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 MED30Q96HR3 178 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 SERPINB11Q96P15 392 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 ZNF251Q9BRH9 671 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 FEM1AQ9BSK4 669 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 DGCR6LQ9BY27 220 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 SHARPINQ9H0F6 387 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 SLC40A1Q9NP59 571 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 NRN1Q9NPD7 142 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 SDR39U1Q9NRG7 319 aaPredicted RBP4.31□□□□□ -1.72
GABPB1-204ENST00000396464 PDE10AQ9Y233 779 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 OR2W1Q9Y3N9 320 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 TOP2BQ02880 1626 aa4.31□□□□□ -1.72
GABPB1-204ENST00000396464 NSG1A0A0A6YYJ2 146 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 A0A0J9YVX5 310 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 TMEM213A2RRL7 107 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 CCDC182A6NF36 153 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 CENPBD1B2RD01 187 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 AIM2O14862 343 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 RPP14O95059 124 aaKnown RBP4.3□□□□□ -1.72
GABPB1-204ENST00000396464 SMIM10L1P0DMW3 83 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 WT1P19544 449 aaPredicted RBP4.3□□□□□ -1.72
GABPB1-204ENST00000396464 KDELR2P33947 212 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 UGT1A3P35503 534 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 HMGCLP35914 325 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 CSKP41240 450 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 NSG1P42857 185 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 PROK1P58294 105 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 RPL27P61353 136 aaKnown RBP4.3□□□□□ -1.72
GABPB1-204ENST00000396464 ZNF234Q14588 700 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 FAM189A2Q15884 450 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 UAP1Q16222 522 aaPredicted RBP4.3□□□□□ -1.72
GABPB1-204ENST00000396464 GABRA6Q16445 453 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 FGD3Q5JSP0 725 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 C3P1Q6ZMU1 363 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 ZNF730Q6ZMV8 503 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 ZNF793Q6ZN11 406 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 ZNF621Q6ZSS3 439 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 SPAG16Q8N0X2 631 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 ZNF786Q8N393 782 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 MAPKAPK5-AS1Q8N8E1 139 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 TTC29Q8NA56 475 aaPredicted RBP4.3□□□□□ -1.72
GABPB1-204ENST00000396464 OR2AP1Q8NGE2 309 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 OR56A4Q8NGH8 313 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 OR2L8Q8NGY9 312 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 ENKURQ8TC29 256 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 LGALS14Q8TCE9 139 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 TFGQ92734 400 aaPredicted RBP4.3□□□□□ -1.72
GABPB1-204ENST00000396464 SMARCD2Q92925 531 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 DLX4Q92988 240 aaPredicted RBP4.3□□□□□ -1.72
GABPB1-204ENST00000396464 UBE2E3Q969T4 207 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 OTUB2Q96DC9 234 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 SDSLQ96GA7 329 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 SMIM10Q96HG1 83 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 ZNF641Q96N77 438 aaPredicted RBP4.3□□□□□ -1.72
GABPB1-204ENST00000396464 TNFRSF13CQ96RJ3 184 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 KCNA7Q96RP8 456 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 CLCC1Q96S66 551 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 NXF3Q9H4D5 531 aaKnown RBP4.3□□□□□ -1.72
GABPB1-204ENST00000396464 KIR3DX1Q9H7L2 352 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 METTL8Q9H825 291 aaKnown RBP4.3□□□□□ -1.72
GABPB1-204ENST00000396464 WDR54Q9H977 334 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 BFARQ9NZS9 450 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 APOBEC3BQ9UH17 382 aaKnown RBP4.3□□□□□ -1.72
GABPB1-204ENST00000396464 USP16Q9Y5T5 823 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 WDR62O43379 1518 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 CUX1P39880 1505 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 TOPBP1Q92547 1522 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 COL3A1P02461 1466 aaPredicted RBP4.3□□□□□ -1.72
GABPB1-204ENST00000396464 USP47Q96K76 1375 aa4.3□□□□□ -1.72
GABPB1-204ENST00000396464 GAGE12JA6NER3 117 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 H3BN98 237 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 M0QXV9 152 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 ZNHIT1O43257 154 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 GPX5O75715 221 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 SOX30O94993 753 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 AP2A1O95782 977 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 IGSF6O95976 241 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 GP1BAP07359 652 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms