RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 SYT14P1Q58G82 188 aa14.82□□□□□ -0.04
CXCL1-201ENST00000395761 RELL2Q8NC24 303 aaPredicted RBP14.82□□□□□ -0.04
CXCL1-201ENST00000395761 OR4D11Q8NGI4 311 aa14.82□□□□□ -0.04
CXCL1-201ENST00000395761 SLC26A7Q8TE54 656 aa14.82□□□□□ -0.04
CXCL1-201ENST00000395761 SLC25A43Q8WUT9 341 aaPredicted RBP14.82□□□□□ -0.04
CXCL1-201ENST00000395761 C3orf49Q96BT1 292 aa14.82□□□□□ -0.04
CXCL1-201ENST00000395761 ARL5BQ96KC2 179 aa14.82□□□□□ -0.04
CXCL1-201ENST00000395761 RAB3IPQ96QF0 476 aaPredicted RBP14.82□□□□□ -0.04
CXCL1-201ENST00000395761 ARHGDIGQ99819 225 aa14.82□□□□□ -0.04
CXCL1-201ENST00000395761 PRRG4Q9BZD6 226 aa14.82□□□□□ -0.04
CXCL1-201ENST00000395761 PCDHAC1Q9H158 963 aa14.82□□□□□ -0.04
CXCL1-201ENST00000395761 RNF122Q9H9V4 155 aa14.82□□□□□ -0.04
CXCL1-201ENST00000395761 PAQR5Q9NXK6 330 aaPredicted RBP14.82□□□□□ -0.04
CXCL1-201ENST00000395761 ZNF629Q9UEG4 869 aaPredicted RBP14.82□□□□□ -0.04
CXCL1-201ENST00000395761 EGFL7Q9UHF1 273 aa14.82□□□□□ -0.04
CXCL1-201ENST00000395761 MAGEL2Q9UJ55 1249 aa14.82□□□□□ -0.04
CXCL1-201ENST00000395761 KLF2Q9Y5W3 355 aaPredicted RBP14.82□□□□□ -0.04
CXCL1-201ENST00000395761 SNX13Q9Y5W8 968 aa14.82□□□□□ -0.04
CXCL1-201ENST00000395761 ASH1LQ9NR48 2969 aaKnown RBP14.81□□□□□ -0.04
CXCL1-201ENST00000395761 ZC3H12DA2A288 527 aaKnown RBP14.81□□□□□ -0.04
CXCL1-201ENST00000395761 TMEM229AB2RXF0 380 aa14.81□□□□□ -0.04
CXCL1-201ENST00000395761 M0R3H8 397 aa14.81□□□□□ -0.04
CXCL1-201ENST00000395761 SYT5O00445 386 aa14.81□□□□□ -0.04
CXCL1-201ENST00000395761 DVL2O14641 736 aa14.81□□□□□ -0.04
CXCL1-201ENST00000395761 GMNNO75496 209 aa14.81□□□□□ -0.04
CXCL1-201ENST00000395761 FESP07332 822 aa14.81□□□□□ -0.04
CXCL1-201ENST00000395761 C8BP07358 591 aa14.81□□□□□ -0.04
CXCL1-201ENST00000395761 NQO1P15559 274 aaKnown RBP14.81□□□□□ -0.04
CXCL1-201ENST00000395761 KLK2P20151 261 aa14.81□□□□□ -0.04
CXCL1-201ENST00000395761 ENPP1P22413 925 aa14.81□□□□□ -0.04
CXCL1-201ENST00000395761 CXCR1P25024 350 aa14.81□□□□□ -0.04
CXCL1-201ENST00000395761 MSX2P35548 267 aaPredicted RBP14.81□□□□□ -0.04
CXCL1-201ENST00000395761 RGS8P57771 180 aaPredicted RBP14.81□□□□□ -0.04
CXCL1-201ENST00000395761 MYBPHQ13203 477 aa14.81□□□□□ -0.04
CXCL1-201ENST00000395761 NPTX1Q15818 432 aa14.81□□□□□ -0.04
CXCL1-201ENST00000395761 TMPPEQ6ZT21 453 aa14.81□□□□□ -0.04
CXCL1-201ENST00000395761 RBM45Q8IUH3 476 aaKnown RBP14.81□□□□□ -0.04
CXCL1-201ENST00000395761 KCNJ16Q9NPI9 418 aa14.81□□□□□ -0.04
CXCL1-201ENST00000395761 KLHL28Q9NXS3 571 aa14.81□□□□□ -0.04
CXCL1-201ENST00000395761 PRDM4Q9UKN5 801 aa14.81□□□□□ -0.04
CXCL1-201ENST00000395761 MCTS1Q9ULC4 181 aaKnown RBP14.81□□□□□ -0.04
CXCL1-201ENST00000395761 POMPQ9Y244 141 aa14.81□□□□□ -0.04
CXCL1-201ENST00000395761 SPIN1Q9Y657 262 aaPredicted RBP14.81□□□□□ -0.04
CXCL1-201ENST00000395761 FLNBO75369 2602 aaKnown RBP14.81□□□□□ -0.04
CXCL1-201ENST00000395761 DOCK7Q96N67 2140 aa14.81□□□□□ -0.04
CXCL1-201ENST00000395761 IGHV3-15A0A0B4J1V0 119 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 A0A1B0GWA3 101 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 A0A1W2PNV4 684 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 SULT2B1O00204 365 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 ARPC2O15144 300 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 ZNF208O43345 1280 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 TNFSF13O75888 250 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 IFNA14P01570 189 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 OPRM1P35372 400 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 KIR2DL2P43627 348 aaPredicted RBP14.8□□□□□ -0.04
CXCL1-201ENST00000395761 DIO1P49895 249 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 RAC3P60763 192 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 TFF3Q07654 80 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 OR1Q1Q15612 314 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 ZNF239Q16600 458 aaKnown RBP14.8□□□□□ -0.04
CXCL1-201ENST00000395761 NRF1Q16656 503 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 SLC25A35Q3KQZ1 300 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 SP5Q6BEB4 398 aaPredicted RBP14.8□□□□□ -0.04
CXCL1-201ENST00000395761 LCN8Q6JVE9 175 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 ZNF771Q7L3S4 317 aaPredicted RBP14.8□□□□□ -0.04
CXCL1-201ENST00000395761 ATG4DQ86TL0 474 aaPredicted RBP14.8□□□□□ -0.04
CXCL1-201ENST00000395761 DHFR2Q86XF0 187 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 LSMEM1Q8N8F7 131 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 OR6T1Q8NGN1 323 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 VANGL1Q8TAA9 524 aaPredicted RBP14.8□□□□□ -0.04
CXCL1-201ENST00000395761 POP5Q969H6 163 aaKnown RBP14.8□□□□□ -0.04
CXCL1-201ENST00000395761 CPNE4Q96A23 557 aaPredicted RBP14.8□□□□□ -0.04
CXCL1-201ENST00000395761 ZFP3Q96NJ6 502 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 ZNF559Q9BR84 538 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 TRIM2Q9C040 744 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 TIGARQ9NQ88 270 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 CLEC4AQ9UMR7 237 aa14.8□□□□□ -0.04
CXCL1-201ENST00000395761 IL18BPO95998 194 aa14.79□□□□□ -0.04
CXCL1-201ENST00000395761 IMPDH2P12268 514 aa14.79□□□□□ -0.04
CXCL1-201ENST00000395761 FCGR2AP12318 317 aa14.79□□□□□ -0.04
CXCL1-201ENST00000395761 NCK1P16333 377 aa14.79□□□□□ -0.04
CXCL1-201ENST00000395761 TNFRSF1BP20333 461 aa14.79□□□□□ -0.04
CXCL1-201ENST00000395761 CLK1P49759 484 aaKnown RBP14.79□□□□□ -0.04
CXCL1-201ENST00000395761 SIRPAP78324 504 aa14.79□□□□□ -0.04
CXCL1-201ENST00000395761 LRRC23Q53EV4 343 aaPredicted RBP14.79□□□□□ -0.04
CXCL1-201ENST00000395761 CYBRD1Q53TN4 286 aa14.79□□□□□ -0.04
CXCL1-201ENST00000395761 MTX3Q5HYI7 312 aa14.79□□□□□ -0.04
CXCL1-201ENST00000395761 OR2A2Q6IF42 318 aa14.79□□□□□ -0.04
CXCL1-201ENST00000395761 VWA1Q6PCB0 445 aa14.79□□□□□ -0.04
CXCL1-201ENST00000395761 FCRLAQ7L513 359 aa14.79□□□□□ -0.04
CXCL1-201ENST00000395761 MED12LQ86YW9 2145 aa14.79□□□□□ -0.04
CXCL1-201ENST00000395761 CNEP1R1Q8N9A8 125 aa14.79□□□□□ -0.04
CXCL1-201ENST00000395761 CCDC124Q96CT7 223 aaKnown RBP14.79□□□□□ -0.04
CXCL1-201ENST00000395761 STARD4Q96DR4 205 aa14.79□□□□□ -0.04
CXCL1-201ENST00000395761 MCHR1Q99705 422 aa14.79□□□□□ -0.04
CXCL1-201ENST00000395761 SFXN3Q9BWM7 321 aa14.79□□□□□ -0.04
CXCL1-201ENST00000395761 NPDC1Q9NQX5 325 aaPredicted RBP14.79□□□□□ -0.04
CXCL1-201ENST00000395761 DCAF13Q9NV06 445 aaKnown RBP14.79□□□□□ -0.04
CXCL1-201ENST00000395761 RPS6KB2Q9UBS0 482 aa14.79□□□□□ -0.04
CXCL1-201ENST00000395761 TESQ9UGI8 421 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms