RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 SEMA3CQ99985 751 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 SNHG12Q9BXW3 62 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 TMEM27Q9HBJ8 222 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 GOLGA2P5Q9HBQ8 144 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 TAS2R10Q9NYW0 307 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 SBF1O95248 1867 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 RNF222A6NCQ9 220 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 DRGXA6NNA5 263 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 CLDN11O75508 207 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 SNAPC5O75971 98 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 SLC2A1P11166 492 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 MAPK3P27361 379 aaPredicted RBP11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 DGKGP49619 791 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 GLO1Q04760 184 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 FZD5Q13467 585 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 FNDC3BQ53EP0 1204 aaKnown RBP11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 TMEM31Q5JXX7 168 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 NKAPLQ5M9Q1 402 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 ZNF322Q6U7Q0 402 aaPredicted RBP11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 SLC36A4Q6YBV0 504 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 PARGQ86W56 976 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 THNSL2Q86YJ6 484 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 TRAPPC5Q8IUR0 188 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 SECTM1Q8WVN6 248 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 PSMG2Q969U7 264 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 SMARCD1Q96GM5 515 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 PARD6GQ9BYG4 376 aaPredicted RBP11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 P2RY12Q9H244 342 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 TMEM30AQ9NV96 361 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 ASB6Q9NWX5 421 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 ASIC5Q9NY37 505 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 MMP24Q9Y5R2 645 aa11.6□□□□□ -0.55
SLC28A1-203ENST00000394573 C1orf226A1L170 272 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 MEIS3P1A6NDR6 274 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 OR5H14A6NHG9 310 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 RNASEK-C17orf49H0YIS7 233 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 PSMD9O00233 223 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 DLEU1O43261 78 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 UGDHO60701 494 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 NDUFB6O95139 128 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 SOD3P08294 240 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 LIPCP11150 499 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 PRPS1L1P21108 318 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 MMP11P24347 488 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 OMPP47874 163 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 RPL34P49207 117 aaKnown RBP11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 RPS26P62854 115 aaKnown RBP11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 PJVKQ0ZLH3 352 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 MTAPQ13126 283 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 TMEM244Q5VVB8 128 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 PSRC1Q6PGN9 363 aaPredicted RBP11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 C5orf24Q7Z6I8 188 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 IQCHQ86VS3 1027 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 PCSK9Q8NBP7 692 aaKnown RBP11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 C17orf47Q8NEP4 570 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 FOXRED1Q96CU9 486 aaPredicted RBP11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 HMCESQ96FZ2 354 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 HSPA12BQ96MM6 686 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 RSPO3Q9BXY4 272 aaPredicted RBP11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 PRDM7Q9NQW5 492 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 ADAMTS5Q9UNA0 930 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 A0A0B4J2A0 478 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 TRAPPC13A5PLN9 417 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 A8MWP6 167 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 ATP1B1P05026 303 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 ARF4P18085 180 aaPredicted RBP11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 AQP2P41181 271 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 ZNF574Q6ZN55 896 aaPredicted RBP11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 SLC36A1Q7Z2H8 476 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 PRICKLE2Q7Z3G6 844 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 GPR137CQ8N3F9 429 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 SIRT6Q8N6T7 355 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 SULT4A1Q9BR01 284 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 SELENOIQ9C0D9 397 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 SHPKQ9UHJ6 478 aa11.59□□□□□ -0.55
SLC28A1-203ENST00000394573 FAM86C2PA6NEL3 165 aa11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 GGT3PA6NGU5 568 aa11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 DUXAA6NLW8 204 aa11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 ALOX12BO75342 701 aa11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 CLDN9O95484 217 aa11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 SLC2A10O95528 541 aa11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 IL33O95760 270 aa11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 IL5P05113 134 aa11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 AMD1P17707 334 aa11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 RPS15P62841 145 aaKnown RBP11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 ELFN2Q5R3F8 820 aa11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 LPCAT3Q6P1A2 487 aa11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 ZNF529Q6P280 563 aa11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 LANCL3Q6ZV70 420 aa11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 PAQR9Q6ZVX9 377 aa11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 TMED4Q7Z7H5 227 aa11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 RANBP3LQ86VV4 465 aaPredicted RBP11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 NRROSQ86YC3 692 aa11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 ZNF280BQ86YH2 543 aa11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 BPIFB2Q8N4F0 458 aa11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 MTMR14Q8NCE2 650 aa11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 Q8NFD4 153 aa11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 SMPDL3BQ92485 455 aa11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 SLC39A7Q92504 469 aa11.58□□□□□ -0.56
SLC28A1-203ENST00000394573 JSRP1Q96MG2 331 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms