RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 COX6A1P12074 109 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 ETV1P50549 477 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 CBFBQ13951 182 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 SPHARQ15513 63 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 ISXQ2M1V0 245 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 PLBD1Q6P4A8 553 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 GID4Q8IVV7 300 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 IMMP1LQ96LU5 166 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 GPX7Q96SL4 187 aaPredicted RBP13.62□□□□□ -0.23
CCT4-201ENST00000394440 STRADBQ9C0K7 418 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 ZNF700Q9H0M5 742 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 MMP25Q9NPA2 562 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 SDK2Q58EX2 2172 aa13.62□□□□□ -0.23
CCT4-201ENST00000394440 TMEM129A0AVI4 362 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 PMS2P1A4D2B8 440 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 B4DXG7 233 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 MCIDASD6RGH6 385 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 STK17BO94768 372 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 APOL3O95236 402 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 BCL10O95999 233 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 E2F1Q01094 437 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 SSX1Q16384 188 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 ARHGAP11AQ6P4F7 1023 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 ASCL5Q7RTU5 278 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 ATCAYQ86WG3 371 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 GPR119Q8TDV5 335 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 TTC9Q92623 222 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 PTP4A1Q93096 173 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 KISS1RQ969F8 398 aaPredicted RBP13.61□□□□□ -0.23
CCT4-201ENST00000394440 TMCO6Q96DC7 493 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 LIN37Q96GY3 246 aaPredicted RBP13.61□□□□□ -0.23
CCT4-201ENST00000394440 JAM3Q9BX67 310 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 TIMMDC1Q9NPL8 285 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 TMEM9BQ9NQ34 198 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 HIF3AQ9Y2N7 669 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 J3QRE1 110 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 WISP1O95388 367 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 DLGAP3O95886 979 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 IGHA1P01876 353 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 SCG5P05408 212 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 ASAH2BP0C7U1 165 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 GADD45AP24522 165 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 ITPKBP27987 946 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 VBP1P61758 197 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 NCS1P62166 190 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 LTBQ06643 244 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 RAB11FIP2Q7L804 512 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 B4GALNT2Q8NHY0 566 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 NDNFQ8TB73 568 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 DUSP19Q8WTR2 217 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 MOGAT1Q96PD6 335 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 ZNF649Q9BS31 505 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 ZPBPQ9BS86 351 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 EXOSC1Q9Y3B2 195 aaKnown RBP13.61□□□□□ -0.23
CCT4-201ENST00000394440 PCDHGA3Q9Y5H0 932 aa13.61□□□□□ -0.23
CCT4-201ENST00000394440 PCNX2A6NKB5 2137 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 MYL12BO14950 172 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 FBXO45P0C2W1 286 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 TSPAN19P0C672 248 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 LIMS3P0CW19 117 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 LIMS4P0CW20 117 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 SLC2A5P22732 501 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 CLDN6P56747 220 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 ITGADQ13349 1161 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 CRMP1Q14194 572 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 QPRTQ15274 297 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 TSTQ16762 297 aaKnown RBP13.6□□□□□ -0.23
CCT4-201ENST00000394440 MEPCEQ7L2J0 689 aaKnown RBP13.6□□□□□ -0.23
CCT4-201ENST00000394440 SLC37A3Q8NCC5 494 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 OR5M3Q8NGP4 307 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 DDA1Q9BW61 102 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 SPRY4Q9C004 299 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 MED20Q9H944 212 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 NRIP3Q9NQ35 241 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 TOR4AQ9NXH8 423 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 CFAP54Q96N23 3096 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 RIIAD1A6NNX1 92 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 CCRL2O00421 344 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 ARPC3O15145 178 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 AIREO43918 545 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 GMFGO60234 142 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 OR2J2O76002 312 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 HSMCR30P0CW71 290 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 HK1P19367 917 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 NOS3P29474 1203 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 TMED10P49755 219 aaKnown RBP13.6□□□□□ -0.23
CCT4-201ENST00000394440 PRPS1P60891 318 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 LSM3P62310 102 aaKnown RBP13.6□□□□□ -0.23
CCT4-201ENST00000394440 COL28A1Q2UY09 1125 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 BTBD16Q32M84 506 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 DPY19L2P2Q6ZN68 376 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 SHFQ7M4L6 423 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 LRRC75AQ8NAA5 344 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 ZNF485Q8NCK3 441 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 OR4F15Q8NGB8 312 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 KTI12Q96EK9 354 aaPredicted RBP13.6□□□□□ -0.23
CCT4-201ENST00000394440 H2AFY2Q9P0M6 372 aaPredicted RBP13.6□□□□□ -0.23
CCT4-201ENST00000394440 EML6Q6ZMW3 1958 aa13.6□□□□□ -0.23
CCT4-201ENST00000394440 A0A1W2PNU3 283 aaPredicted RBP13.59□□□□□ -0.23
CCT4-201ENST00000394440 CCDC182A6NF36 153 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms