RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 ZNF574Q6ZN55 896 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-203ENST00000394269 MOSPD2Q8NHP6 518 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 STT3BQ8TCJ2 826 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 ADAMTS18Q8TE60 1221 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 DAZLQ92904 295 aaKnown RBP10.2□□□□□ -0.78
TCOF1-203ENST00000394269 ZNF524Q96C55 264 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 DIRAS2Q96HU8 199 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 ARHGAP9Q9BRR9 750 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 KATNB1Q9BVA0 655 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 DUSP15Q9H1R2 295 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-203ENST00000394269 APMAPQ9HDC9 416 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 NANSQ9NR45 359 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 POLE3Q9NRF9 147 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 CLEC4AQ9UMR7 237 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 TMEM265A0A087WTH1 108 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 E9PI62 339 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 ZNF264O43296 627 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 PLGP00747 810 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-203ENST00000394269 PEPDP12955 493 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 RPS5P46782 204 aaKnown RBP10.2□□□□□ -0.78
TCOF1-203ENST00000394269 GPLD1P80108 840 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 ZNF141Q15928 474 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 SLC25A30Q5SVS4 291 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 C1QL3Q5VWW1 255 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 SLC29A4Q7RTT9 530 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 NEIL3Q8TAT5 605 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 SMPDL3BQ92485 455 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 FGF11Q92914 225 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 C3orf49Q96BT1 292 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 MOGAT1Q96PD6 335 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 SMURF1Q9HCE7 757 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 FGF20Q9NP95 211 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-203ENST00000394269 CMC2Q9NRP2 79 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 FAIMQ9NVQ4 179 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 SLC35A3Q9Y2D2 325 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 LRP4O75096 1905 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 APC2O95996 2303 aa10.2□□□□□ -0.78
TCOF1-203ENST00000394269 A0A1B0GVC2 190 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 A0A1W2PQL4 384 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-203ENST00000394269 IRGMA1A4Y4 181 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 FUOMA2VDF0 154 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 A6NIN4 97 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 ZNF670-ZNF695F2Z2N8 137 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 FMO6PO60774 539 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 NDUFB2O95178 105 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 IFNGP01579 166 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 CPEP16870 476 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 TACR3P29371 465 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 PPICP45877 212 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 EPHA4P54764 986 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 SHBQ15464 509 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 EXOSC6Q5RKV6 272 aaKnown RBP10.19□□□□□ -0.78
TCOF1-203ENST00000394269 ZNF322Q6U7Q0 402 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-203ENST00000394269 FAM131AQ6UXB0 335 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 GID4Q8IVV7 300 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 D2HGDHQ8N465 521 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 RFLNBQ8N5W9 214 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 CLDN23Q96B33 292 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 C4orf36Q96KX1 117 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 ZNF285Q96NJ3 590 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 SLC46A1Q96NT5 459 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 SLC30A2Q9BRI3 323 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 AKIRIN1Q9H9L7 192 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-203ENST00000394269 SIRT4Q9Y6E7 314 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-203ENST00000394269 TMEM129A0AVI4 362 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 OPN1LWP04000 364 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 HEXBP07686 556 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 RPS27P42677 84 aaKnown RBP10.19□□□□□ -0.78
TCOF1-203ENST00000394269 GPR143P51810 404 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 PSMD4P55036 377 aaKnown RBP10.19□□□□□ -0.78
TCOF1-203ENST00000394269 IGLV3-21P80748 117 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-203ENST00000394269 PLK5Q496M5 336 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 PWWP2BQ6NUJ5 590 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 C9orf40Q8IXQ3 194 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 CLDN22Q8N7P3 220 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 ZPLD1Q8TCW7 415 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 DUSP19Q8WTR2 217 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 CHPT1Q8WUD6 406 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 ZNF501Q96CX3 271 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-203ENST00000394269 Q96M85 177 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 PCED1AQ9H1Q7 454 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 CRNNQ9UBG3 495 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-203ENST00000394269 COL4A2P08572 1712 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 A0A1W2PRG6 482 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-203ENST00000394269 LAMTOR5O43504 91 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 PTP4A3O75365 173 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 SCRG1O75711 98 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 WISP1O95388 367 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 DDAH2O95865 285 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 ELAVL1Q15717 326 aaKnown RBP10.19□□□□□ -0.78
TCOF1-203ENST00000394269 KLHL26Q53HC5 615 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 ZNF362Q5T0B9 420 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-203ENST00000394269 FAM199XQ6PEV8 388 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-203ENST00000394269 MRGPREQ86SM8 312 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 ZNF721Q8TF20 911 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 DNAJA4Q8WW22 397 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-203ENST00000394269 RPRD1BQ9NQG5 326 aaKnown RBP10.19□□□□□ -0.78
TCOF1-203ENST00000394269 INIPQ9NRY2 104 aa10.19□□□□□ -0.78
TCOF1-203ENST00000394269 ASB6Q9NWX5 421 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms