RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 PNMA8CA0A1B0GUJ8 204 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 MPZL2O60487 215 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 OR2J2O76002 312 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 CD36P16671 472 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 TACR3P29371 465 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 EVI2BP34910 448 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 ETV1P50549 477 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 SLC26A5P58743 744 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 LTBQ06643 244 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 OCLNQ16625 522 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 TMEM205Q6UW68 189 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 RNF113BQ8IZP6 322 aaKnown RBP13.65□□□□□ -0.22
MKS1-202ENST00000393119 LGALS12Q96DT0 336 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 RNFT2Q96EX2 444 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 TAPBPLQ9BX59 468 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 SLC35A3Q9Y2D2 325 aa13.65□□□□□ -0.22
MKS1-202ENST00000393119 ISPDA4D126 451 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 SH3D21A4FU49 640 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 ANKRD34BA5PLL1 514 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 MCIDASD6RGH6 385 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 TO15178 435 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 FADS1O60427 444 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 SOX3P41225 446 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 PPP5CP53041 499 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 CTBP2P56545 445 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 CSNK2BP67870 215 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 OR2G6Q5TZ20 316 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 UBE2UQ5VVX9 321 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 ATG4DQ86TL0 474 aaPredicted RBP13.64□□□□□ -0.23
MKS1-202ENST00000393119 KTI12Q96EK9 354 aaPredicted RBP13.64□□□□□ -0.23
MKS1-202ENST00000393119 FAM86C1Q9NVL1 165 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 ICAM5Q9UMF0 924 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 RALGAPA1Q6GYQ0 2036 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 SERPINI2O75830 405 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 NADKO95544 446 aaPredicted RBP13.64□□□□□ -0.23
MKS1-202ENST00000393119 KLK3P07288 261 aaPredicted RBP13.64□□□□□ -0.23
MKS1-202ENST00000393119 FOXK1P85037 733 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 DGUOKQ16854 277 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 BTBD16Q32M84 506 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 VASH1Q7L8A9 365 aaPredicted RBP13.64□□□□□ -0.23
MKS1-202ENST00000393119 SLC46A3Q7Z3Q1 461 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 CMIPQ8IY22 773 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 CDK20Q8IZL9 346 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 SVOPQ8N4V2 548 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 OR51L1Q8NGJ5 315 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 MOSPD2Q8NHP6 518 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 PTP4A1Q93096 173 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 ZNF486Q96H40 463 aaPredicted RBP13.64□□□□□ -0.23
MKS1-202ENST00000393119 CMKLR1Q99788 373 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 FN3KQ9H479 309 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 PARD6AQ9NPB6 346 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 UGT2A1Q9Y4X1 527 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 PCDHGA5Q9Y5G8 931 aa13.64□□□□□ -0.23
MKS1-202ENST00000393119 COL27A1Q8IZC6 1860 aaPredicted RBP13.63□□□□□ -0.23
MKS1-202ENST00000393119 GALR2O43603 387 aaPredicted RBP13.63□□□□□ -0.23
MKS1-202ENST00000393119 STK17BO94768 372 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 ONECUT2O95948 504 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 GP1BAP07359 652 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 HBQ1P09105 142 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 GADD45AP24522 165 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 DCAF7P61962 342 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 FOXK2Q01167 660 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 TRA2AQ13595 282 aaKnown RBP eCLIP13.63□□□□□ -0.23
MKS1-202ENST00000393119 PCOLCEQ15113 449 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 TBCEQ15813 527 aaPredicted RBP13.63□□□□□ -0.23
MKS1-202ENST00000393119 ARMCX4Q5H9R4 360 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 AADACL4Q5VUY2 407 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 LHFPL3Q86UP9 236 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 LYSMD2Q8IV50 215 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 C10orf53Q8N6V4 93 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 SUMF1Q8NBK3 374 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 TOR1AIP2Q8NFQ8 470 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 ZPLD1Q8TCW7 415 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 BRIX1Q8TDN6 353 aaKnown RBP13.63□□□□□ -0.23
MKS1-202ENST00000393119 DACH2Q96NX9 599 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 SLC38A2Q96QD8 506 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 OR51E2Q9H255 320 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 SLC26A1Q9H2B4 701 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 TOR4AQ9NXH8 423 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 FOXJ2Q9P0K8 574 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 GPN3Q9UHW5 284 aaPredicted RBP13.63□□□□□ -0.23
MKS1-202ENST00000393119 HS3ST3B1Q9Y662 390 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 ALPK2Q86TB3 2170 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 EFCAB10A6NFE3 127 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 ELOA3DA6NLF2 546 aaPredicted RBP13.63□□□□□ -0.23
MKS1-202ENST00000393119 ALG1L2C9J202 215 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 BLOC1S5-TXNDC5H3BN57 136 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 CSO75390 466 aaKnown RBP13.63□□□□□ -0.23
MKS1-202ENST00000393119 ZNF883P0CG24 379 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 BMP7P18075 431 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 ADH7P40394 386 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 ELOA3BQ3SY89 546 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 RAB11FIP2Q7L804 512 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 ELOA3Q8NG57 546 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 OR10G3Q8NGC4 313 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 ZNRF4Q8WWF5 429 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 TMEM80Q96HE8 168 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 TBX5Q99593 518 aa13.63□□□□□ -0.23
MKS1-202ENST00000393119 POLR2J2Q9GZM3 115 aaKnown RBP13.63□□□□□ -0.23
MKS1-202ENST00000393119 OR51V1Q9H2C8 321 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms