RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 KLRF1Q9NZS2 232 aa12.32□□□□□ -0.44
PTN-202ENST00000393083 M0R129 80 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 SLC1A7O00341 560 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 ADAM10O14672 748 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 NUDT14O95848 222 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 ATP6V1B1P15313 513 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 PGCP20142 388 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 FMO3P31513 532 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 P2RX1P51575 399 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 CDH15P55291 814 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 CBFBQ13951 182 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 ZNF791Q3KP31 576 aaPredicted RBP12.31□□□□□ -0.44
PTN-202ENST00000393083 SLX4IPQ5VYV7 408 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 LAIR2Q6ISS4 152 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 RPUSD3Q6P087 351 aaKnown RBP12.31□□□□□ -0.44
PTN-202ENST00000393083 GPALPP1Q8IXQ4 340 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 CDK20Q8IZL9 346 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 TMEM156Q8N614 296 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 TSPAN14Q8NG11 270 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 OR10G3Q8NGC4 313 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 OR5W2Q8NH69 310 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 B4GALNT2Q8NHY0 566 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 RNF138Q8WVD3 245 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 ASB15Q8WXK1 588 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 SCMH1Q96GD3 660 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 KLHDC3Q9BQ90 382 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 HES7Q9BYE0 225 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 METTL7AQ9H8H3 244 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 C20orf141Q9NUB4 165 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 RYDENQ9NUL5 291 aaKnown RBP12.31□□□□□ -0.44
PTN-202ENST00000393083 TBC1D23Q9NUY8 699 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 AASSQ9UDR5 926 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 BLOC1S6Q9UL45 172 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 ICAM5Q9UMF0 924 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 PCDHGB6Q9Y5F9 930 aa12.31□□□□□ -0.44
PTN-202ENST00000393083 A0A087WUJ7 227 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 UNC119BA6NIH7 251 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 ELOA3DA6NLF2 546 aaPredicted RBP12.3□□□□□ -0.44
PTN-202ENST00000393083 ENO4A6NNW6 628 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 SP1P08047 785 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 MAKP20794 623 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 MST1P26927 711 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 CTBP2P56545 445 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 C19orf57Q0VDD7 668 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 ELOA3BQ3SY89 546 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 ZNF766Q5HY98 468 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 C12orf73Q69YU5 71 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 OPN5Q6U736 354 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 IL20RBQ6UXL0 311 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 LINC00114Q6XXX2 140 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 ZNF620Q6ZNG0 422 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 MDGA2Q7Z553 956 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 ATG4DQ86TL0 474 aaPredicted RBP12.3□□□□□ -0.44
PTN-202ENST00000393083 P3H2Q8IVL5 708 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 CYP4Z2PQ8N1L4 340 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 IQCF1Q8N6M8 205 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 ELOA3Q8NG57 546 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 OR8D4Q8NGM9 314 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 DUSP19Q8WTR2 217 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 APH1BQ8WW43 257 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 UBE2FQ969M7 185 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 BPIFA2Q96DR5 249 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 PLA2G12AQ9BZM1 189 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 SLC25A19Q9HC21 320 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 GALNT9Q9HCQ5 603 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 MEPEQ9NQ76 525 aaPredicted RBP12.3□□□□□ -0.44
PTN-202ENST00000393083 ZNF226Q9NYT6 803 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 CDH10Q9Y6N8 788 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 TRIM64A6NGJ6 449 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 EFCAB9A8MZ26 197 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 CDC42EP2O14613 210 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 TP53I11O14683 189 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 SLC25A12O75746 678 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 CLPTM1O96005 669 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 PNMTP11086 282 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 CD46P15529 392 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 CRHBPP24387 322 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 SLC1A3P43003 542 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 GAS1P54826 345 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 GABARAPL2P60520 117 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 CRYZQ08257 329 aaKnown RBP12.3□□□□□ -0.44
PTN-202ENST00000393083 C17orf67Q0P5P2 114 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 GINS1Q14691 196 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 BICRALQ6AI39 1079 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 SLC25A25Q6KCM7 469 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 CASP12Q6UXS9 341 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 TMPRSS11FQ6ZWK6 438 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 CLDN22Q8N7P3 220 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 BPIFB6Q8NFQ5 453 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 FANK1Q8TC84 345 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 ZNF566Q969W8 418 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 SH2D2AQ9NP31 389 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 HPF1Q9NWY4 346 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 PPP4R1LQ9P1A2 415 aa12.3□□□□□ -0.44
PTN-202ENST00000393083 A0A087WXM4 84 aa12.29□□□□□ -0.44
PTN-202ENST00000393083 C2orf72A6NCS6 295 aa12.29□□□□□ -0.44
PTN-202ENST00000393083 ANKUB1A6NFN9 424 aa12.29□□□□□ -0.44
PTN-202ENST00000393083 NME2P1O60361 137 aa12.29□□□□□ -0.44
PTN-202ENST00000393083 MPZL2O60487 215 aa12.29□□□□□ -0.44
PTN-202ENST00000393083 CDC40O60508 579 aaKnown RBP eCLIP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms