RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 ZNF230Q9UIE0 474 aaPredicted RBP13.84□□□□□ -0.19
CCDC50-201ENST00000392455 TEX264Q9Y6I9 313 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 ARFGEF2Q9Y6D5 1785 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 H7BY64 318 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 ELAVL3Q14576 367 aaKnown RBP13.84□□□□□ -0.19
CCDC50-201ENST00000392455 FBXW12Q6X9E4 464 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 OR2T11Q8NH01 316 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 MBOAT4Q96T53 435 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 SMOXQ9NWM0 555 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 YY2O15391 372 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 RAB1AP62820 205 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 OR51L1Q8NGJ5 315 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 NSUN3Q9H649 340 aaKnown RBP13.84□□□□□ -0.19
CCDC50-201ENST00000392455 MMP7P09237 267 aaPredicted RBP13.84□□□□□ -0.19
CCDC50-201ENST00000392455 BPIFB3P59826 476 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 BAXQ07812 192 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 LY6G5CQ5SRR4 150 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 GLB1L2Q8IW92 636 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 SEC14L5O43304 696 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 CKMT1AP12532 417 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 CD53P19397 219 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 GABRR1P24046 479 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 PAFAH1B3Q15102 231 aaKnown RBP13.84□□□□□ -0.19
CCDC50-201ENST00000392455 FJX1Q86VR8 437 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 NKAIN3Q8N8D7 197 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 OR9I1Q8NGQ6 314 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 ANGPTL6Q8NI99 470 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 ECHDC3Q96DC8 303 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 IGKV6D-41A0A0C4DH26 115 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 GPRIN2O60269 458 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 GSTP1P09211 210 aaKnown RBP13.84□□□□□ -0.19
CCDC50-201ENST00000392455 ELK4P28324 431 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 IL20RBQ6UXL0 311 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 IL34Q6ZMJ4 242 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 RAB8BQ92930 207 aa13.84□□□□□ -0.19
CCDC50-201ENST00000392455 AGPAT2O15120 278 aa13.83□□□□□ -0.19
CCDC50-201ENST00000392455 HPNP05981 417 aa13.83□□□□□ -0.19
CCDC50-201ENST00000392455 CXCR4P61073 352 aa13.83□□□□□ -0.19
CCDC50-201ENST00000392455 PRR18Q8N4B5 295 aa13.83□□□□□ -0.19
CCDC50-201ENST00000392455 PHYHIPQ92561 330 aa13.83□□□□□ -0.19
CCDC50-201ENST00000392455 C1orf198Q9H425 327 aa13.83□□□□□ -0.19
CCDC50-201ENST00000392455 XRN1Q8IZH2 1706 aaKnown RBP13.83□□□□□ -0.2
CCDC50-201ENST00000392455 OSTM1Q86WC4 334 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 FAM217AQ8IXS0 508 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 BRI3BPQ8WY22 251 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 C1orf74Q96LT6 269 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 GMPR2Q9P2T1 348 aaKnown RBP13.83□□□□□ -0.2
CCDC50-201ENST00000392455 PRKACGP22612 351 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 AADACL3Q5VUY0 350 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 SLC35B2Q8TB61 432 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 KCNJ15Q99712 375 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 ZDHHC11Q9H8X9 412 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 MED1Q15648 1581 aaPredicted RBP13.83□□□□□ -0.2
CCDC50-201ENST00000392455 ZNF44P15621 663 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 TACR1P25103 407 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 PCGF2P35227 344 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 ZNF678Q5SXM1 525 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 PLAG1Q6DJT9 500 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 LINC01599Q8WXQ3 324 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 TAAR5O14804 337 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 LEFTY1O75610 366 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 HAPLN1P10915 354 aaPredicted RBP13.83□□□□□ -0.2
CCDC50-201ENST00000392455 GABRA2P47869 451 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 OR4C11Q6IEV9 310 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 SMIM12Q96EX1 92 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 LMF1Q96S06 567 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 ELOVL3Q9HB03 270 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 H0Y8G0 127 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 M0QZ24 198 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 SPINT2O43291 252 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 COTL1Q14019 142 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 NKPD1Q17RQ9 610 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 ZNF355PQ9NSJ1 428 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 ZDHHC18Q9NUE0 388 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 KIAA1456Q9P272 454 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 GPR34Q9UPC5 381 aa13.83□□□□□ -0.2
CCDC50-201ENST00000392455 FAM24AA6NFZ4 105 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 KIAA1324LA8MWY0 1029 aaPredicted RBP13.82□□□□□ -0.2
CCDC50-201ENST00000392455 MTHFD2P13995 350 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 ADPRHP54922 357 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 ACSM1Q08AH1 577 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 SMAGPQ0VAQ4 97 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 SLC35F3Q8IY50 421 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 OR6V1Q8N148 313 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 SRPK3Q9UPE1 567 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 SLC45A1Q9Y2W3 748 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 TMEM82A0PJX8 343 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 PRAMEF11O60813 436 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 ZNF217O75362 1048 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 ETV3P41162 512 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 RPL11P62913 178 aaKnown RBP13.82□□□□□ -0.2
CCDC50-201ENST00000392455 CTU1Q7Z7A3 348 aaKnown RBP13.82□□□□□ -0.2
CCDC50-201ENST00000392455 OR13C8Q8NGS7 320 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 TMEM18Q96B42 140 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 REEP6Q96HR9 211 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 ZNF582Q96NG8 517 aaPredicted RBP13.82□□□□□ -0.2
CCDC50-201ENST00000392455 SCAMP2O15127 329 aaKnown RBP13.82□□□□□ -0.2
CCDC50-201ENST00000392455 TRAPPC2P0DI81 140 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 TRAPPC2BP0DI82 140 aa13.82□□□□□ -0.2
CCDC50-201ENST00000392455 PPP2CAP67775 309 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms