RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 I6L893 689 aaPredicted RBP11.65□□□□□ -0.54
SRGAP3-202ENST00000383836 ANGPTL7O43827 346 aa11.65□□□□□ -0.54
SRGAP3-202ENST00000383836 MT-ND4LP03901 98 aa11.65□□□□□ -0.54
SRGAP3-202ENST00000383836 C18orf21Q32NC0 220 aaPredicted RBP11.65□□□□□ -0.54
SRGAP3-202ENST00000383836 DBX2Q6ZNG2 339 aa11.65□□□□□ -0.54
SRGAP3-202ENST00000383836 USP50Q70EL3 339 aaPredicted RBP11.65□□□□□ -0.54
SRGAP3-202ENST00000383836 NDUFAF7Q7L592 441 aa11.65□□□□□ -0.54
SRGAP3-202ENST00000383836 TMEM239Q8WW34 195 aa11.65□□□□□ -0.54
SRGAP3-202ENST00000383836 UPRTQ96BW1 309 aa11.65□□□□□ -0.54
SRGAP3-202ENST00000383836 TMEM72A0PK05 275 aa11.65□□□□□ -0.55
SRGAP3-202ENST00000383836 C17orf112F2Z3M2 114 aa11.65□□□□□ -0.55
SRGAP3-202ENST00000383836 RBM39Q14498 530 aaKnown RBP11.65□□□□□ -0.55
SRGAP3-202ENST00000383836 LPCAT3Q6P1A2 487 aa11.65□□□□□ -0.55
SRGAP3-202ENST00000383836 KCNRGQ8N5I3 272 aa11.65□□□□□ -0.55
SRGAP3-202ENST00000383836 HOXD1Q9GZZ0 328 aa11.65□□□□□ -0.55
SRGAP3-202ENST00000383836 SPHK1Q9NYA1 384 aa11.65□□□□□ -0.55
SRGAP3-202ENST00000383836 ZMAT5Q9UDW3 170 aaKnown RBP11.65□□□□□ -0.55
SRGAP3-202ENST00000383836 ACTL7AQ9Y615 435 aa11.65□□□□□ -0.55
SRGAP3-202ENST00000383836 ZCWPW2A0A1B0GU75 182 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 FAM171A2A8MVW0 826 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 GIPP09681 153 aaPredicted RBP11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 KITLGP21583 273 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 DAPP51397 102 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 CBLL1Q75N03 491 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 OR4K15Q8NH41 348 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 NANPQ8TBE9 248 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 NRIP3Q9NQ35 241 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 GJD2Q9UKL4 321 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 PRELID3BQ9Y3B1 194 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 PPP5D1E7EU14 171 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 SCO2O43819 266 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 CLEC3AO75596 197 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 C8AP07357 584 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 AHRP35869 848 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 PLCXD2Q0VAA5 305 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 FRMPD2BQ6IN97 320 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 ABHD5Q8WTS1 349 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 MMABQ96EY8 250 aaPredicted RBP11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 SEC22AQ96IW7 307 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 SLC2A11Q9BYW1 496 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 FKTNO75072 461 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 CSO75390 466 aaKnown RBP11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 TOR2AQ5JU69 321 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 ATPAF1Q5TC12 328 aaPredicted RBP11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 SGK3Q96BR1 496 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 SEC22CQ9BRL7 303 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 OR2A25A4D2G3 310 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 ZNF860A6NHJ4 632 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 FTCDNL1E5RQL4 147 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 G0S2P27469 103 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 INHBEP58166 350 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 HABP2Q14520 560 aaPredicted RBP11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 CDS1Q92903 461 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 NSA2O95478 260 aaKnown RBP11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 SEC61A1P61619 476 aaKnown RBP11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 RAB35Q15286 201 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 UMODL1-AS1Q8N2C9 162 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 KATNB1Q9BVA0 655 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 CAMK2AQ9UQM7 478 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 KMT2EQ8IZD2 1858 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 TUBAL3A6NHL2 446 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 ADIRFQ15847 76 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 PDLIM3Q53GG5 364 aaPredicted RBP11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 TMPPEQ6ZT21 453 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 RAB9BQ9NP90 201 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 IER3IP1Q9Y5U9 82 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 H0Y8G0 127 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 EXOSC6Q5RKV6 272 aaKnown RBP11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 CCNJQ5T5M9 372 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 PODNL1Q6PEZ8 512 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 SDR9C7Q8NEX9 313 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 OR1F2PQ96R84 312 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 USP36Q9P275 1121 aaKnown RBP11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 SERTAD3Q9UJW9 196 aa11.64□□□□□ -0.55
SRGAP3-202ENST00000383836 TMEM200CA6NKL6 621 aa11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 HIDE1A8MVS5 230 aa11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 DDNO94850 711 aaPredicted RBP11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 SNRPBP14678 240 aaKnown RBP11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 APEX1P27695 318 aaKnown RBP11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 DAP3P51398 398 aaKnown RBP11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 PHYHD1Q5SRE7 291 aa11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 RNF111Q6ZNA4 994 aa11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 ZNF561Q8N587 486 aa11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 WDTC1Q8N5D0 677 aa11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 OR8J2Q8NGG1 315 aa11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 GAREM1Q9H706 876 aa11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 MED17Q9NVC6 651 aa11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 KCNK6Q9Y257 313 aa11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 BCORQ6W2J9 1755 aa11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 RAD1O60671 282 aa11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 SYNGR4O95473 234 aa11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 PGGHGQ32M88 737 aa11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 DEFB134Q4QY38 66 aa11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 SLX4IPQ5VYV7 408 aa11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 HRASLS5Q96KN8 279 aa11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 SLC25A21Q9BQT8 299 aaPredicted RBP11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 TNRC6CQ9HCJ0 1690 aaKnown RBP11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 POLEQ07864 2286 aa11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 A0A1W2PRU2 124 aa11.63□□□□□ -0.55
SRGAP3-202ENST00000383836 SLC9B1P1A6NJY1 282 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms