RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 EPHX3Q9H6B9 360 aa17.51■□□□□ 0.39
CSPG5-202ENST00000383738 NPAP1Q9NZP6 1156 aa17.51■□□□□ 0.39
CSPG5-202ENST00000383738 KLHL21Q9UJP4 597 aa17.51■□□□□ 0.39
CSPG5-202ENST00000383738 ERVH48-1M5A8F1 160 aa17.51■□□□□ 0.39
CSPG5-202ENST00000383738 SEC14L5O43304 696 aa17.51■□□□□ 0.39
CSPG5-202ENST00000383738 PLRG1O43660 514 aaKnown RBP17.51■□□□□ 0.39
CSPG5-202ENST00000383738 GREM1O60565 184 aa17.51■□□□□ 0.39
CSPG5-202ENST00000383738 IFNA6P05013 189 aa17.51■□□□□ 0.39
CSPG5-202ENST00000383738 GP1BBP13224 206 aa17.51■□□□□ 0.39
CSPG5-202ENST00000383738 EMP2P54851 167 aa17.51■□□□□ 0.39
CSPG5-202ENST00000383738 PPP1CAP62136 330 aa17.51■□□□□ 0.39
CSPG5-202ENST00000383738 C1orf94Q6P1W5 598 aa17.51■□□□□ 0.39
CSPG5-202ENST00000383738 PTOV1Q86YD1 416 aa17.51■□□□□ 0.39
CSPG5-202ENST00000383738 C19orf47Q8N9M1 422 aaKnown RBP17.51■□□□□ 0.39
CSPG5-202ENST00000383738 OR4M1Q8NGD0 313 aa17.51■□□□□ 0.39
CSPG5-202ENST00000383738 KATNB1Q9BVA0 655 aa17.51■□□□□ 0.39
CSPG5-202ENST00000383738 ALG8Q9BVK2 526 aa17.51■□□□□ 0.39
CSPG5-202ENST00000383738 DPH1Q9BZG8 443 aa17.51■□□□□ 0.39
CSPG5-202ENST00000383738 CLEC1BQ9P126 229 aa17.51■□□□□ 0.39
CSPG5-202ENST00000383738 REV1Q9UBZ9 1251 aa17.51■□□□□ 0.39
CSPG5-202ENST00000383738 FBXL2Q9UKC9 423 aa17.51■□□□□ 0.39
CSPG5-202ENST00000383738 LIPT1Q9Y234 373 aa17.51■□□□□ 0.39
CSPG5-202ENST00000383738 A0A1W2PPC4 97 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 LRIT2A6NDA9 550 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 UBE2MP61081 183 aaKnown RBP17.5■□□□□ 0.39
CSPG5-202ENST00000383738 TRMT12Q53H54 448 aaKnown RBP17.5■□□□□ 0.39
CSPG5-202ENST00000383738 C8orf82Q6P1X6 216 aaPredicted RBP17.5■□□□□ 0.39
CSPG5-202ENST00000383738 KRT77Q7Z794 578 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 OR2T33Q8NG76 320 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 OR51Q1Q8NH59 317 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 THEM6Q8WUY1 208 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 TBC1D20Q96BZ9 403 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 NECAB3Q96P71 396 aaPredicted RBP17.5■□□□□ 0.39
CSPG5-202ENST00000383738 PRODH2Q9UF12 536 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 PTRH2Q9Y3E5 179 aaKnown RBP17.5■□□□□ 0.39
CSPG5-202ENST00000383738 TRBV2A0A0J9YWF9 115 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 C5orf67F2Z3F1 127 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 CPMP14384 443 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 VEGFCP49767 419 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 SMCO1Q147U7 214 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 SEC22CQ9BRL7 303 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 ZC3H12DA2A288 527 aaKnown RBP17.5■□□□□ 0.39
CSPG5-202ENST00000383738 GPR75O95800 540 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 GNALP38405 381 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 OR52I1Q8NGK6 324 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 ST8SIA4Q92187 359 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 RBPMSQ93062 196 aaKnown RBP17.5■□□□□ 0.39
CSPG5-202ENST00000383738 HYAL3O43820 417 aaPredicted RBP17.5■□□□□ 0.39
CSPG5-202ENST00000383738 ARL6IP5O75915 188 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 GTF2F2P13984 249 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 DUSP3P51452 185 aaPredicted RBP17.5■□□□□ 0.39
CSPG5-202ENST00000383738 PLGLB1Q02325 96 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 EXOSC2Q13868 293 aaKnown RBP17.5■□□□□ 0.39
CSPG5-202ENST00000383738 OPCMLQ14982 345 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 VWA2Q5GFL6 755 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 ACSM5Q6NUN0 579 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 FAAP20Q6NZ36 180 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 AMER3Q8N944 861 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 ZNF566Q969W8 418 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 S100A16Q96FQ6 103 aaKnown RBP17.5■□□□□ 0.39
CSPG5-202ENST00000383738 FOXN4Q96NZ1 517 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 OR7D2Q96RA2 312 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 NIPAL2Q9H841 368 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 CUTCQ9NTM9 273 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 ACER3Q9NUN7 267 aa17.5■□□□□ 0.39
CSPG5-202ENST00000383738 A0A1W2PR48 441 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 PRODHO43272 600 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 MAS1P04201 325 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 POU3F3P20264 500 aaPredicted RBP17.49■□□□□ 0.39
CSPG5-202ENST00000383738 SFTPDP35247 375 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 BPHLQ86WA6 291 aaPredicted RBP17.49■□□□□ 0.39
CSPG5-202ENST00000383738 TMPRSS12Q86WS5 348 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 OR4K13Q8NH42 304 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 SLC7A13Q8TCU3 470 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 ZMYND19Q96E35 227 aaPredicted RBP17.49■□□□□ 0.39
CSPG5-202ENST00000383738 ANKRD10Q9NXR5 420 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 FLVCR2Q9UPI3 526 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 RNF215Q9Y6U7 377 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 MAGEB4O15481 346 aaPredicted RBP17.49■□□□□ 0.39
CSPG5-202ENST00000383738 TCRBP04435 133 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 DBIP07108 87 aaKnown RBP17.49■□□□□ 0.39
CSPG5-202ENST00000383738 ELK1P19419 428 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 PUM1Q14671 1186 aaKnown RBP eCLIP17.49■□□□□ 0.39
CSPG5-202ENST00000383738 CARD17Q5XLA6 110 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 CCDC71Q8IV32 467 aaPredicted RBP17.49■□□□□ 0.39
CSPG5-202ENST00000383738 SIAH3Q8IW03 269 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 FCAMRQ8WWV6 532 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 SLC25A46Q96AG3 418 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 MSLNLQ96KJ4 702 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 MNTQ99583 582 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 ZNF304Q9HCX3 659 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.49■□□□□ 0.39
CSPG5-202ENST00000383738 ZSCAN32Q9NX65 697 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 CDH10Q9Y6N8 788 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 A0A0A6YYJ9 748 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 FXYD6P3P58550 94 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 TIAL1Q01085 375 aaKnown RBP eCLIP17.49■□□□□ 0.39
CSPG5-202ENST00000383738 SSX1Q16384 188 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 CHTF18Q8WVB6 975 aa17.49■□□□□ 0.39
CSPG5-202ENST00000383738 APH1BQ8WW43 257 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms