RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 FCRL6Q6DN72 434 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 SLC48A1Q6P1K1 146 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 NIPAL3Q6P499 406 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 TMEM81Q6P7N7 255 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 MEPCEQ7L2J0 689 aaKnown RBP8.25□□□□□ -1.09
GPNMB-202ENST00000381990 CEACAM19Q7Z692 300 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 CPOQ8IVL8 374 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 SPICQ8N5J4 248 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 EID2Q8N6I1 236 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 FAM71CQ8NEG0 241 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 OR56A1Q8NGH5 318 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 SMIM4Q8WVI0 70 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 WBP1Q96G27 269 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 KLHL15Q96M94 604 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 TMPRSS13Q9BYE2 586 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 SHARPINQ9H0F6 387 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 METTL17Q9H7H0 456 aaPredicted RBP8.25□□□□□ -1.09
GPNMB-202ENST00000381990 HINT3Q9NQE9 182 aaKnown RBP8.25□□□□□ -1.09
GPNMB-202ENST00000381990 CTPS2Q9NRF8 586 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 SDHAF2Q9NX18 166 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 CES1P1Q9UKY3 287 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 SPTBN5Q9NRC6 3674 aaKnown RBP8.25□□□□□ -1.09
GPNMB-202ENST00000381990 TDRD6O60522 2096 aaKnown RBP8.25□□□□□ -1.09
GPNMB-202ENST00000381990 A0A1B0GUH1 482 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 URADA6NGE7 173 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 GLOD5A6NK44 160 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 SLC22A31A6NKX4 558 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 ATP6V1G2-DDX39BF2Z307 99 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 G3V3Q6 166 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 ZNF749O43361 778 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 TMEM127O75204 238 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 PRKRAO75569 313 aaKnown RBP8.25□□□□□ -1.09
GPNMB-202ENST00000381990 ERAL1O75616 437 aaKnown RBP8.25□□□□□ -1.09
GPNMB-202ENST00000381990 OR5F1O95221 314 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 CD3GP09693 182 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 ZNF888P0CJ79 500 aaPredicted RBP8.25□□□□□ -1.09
GPNMB-202ENST00000381990 CCR6P51684 374 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 NCBP2P52298 156 aaKnown RBP eCLIP8.25□□□□□ -1.09
GPNMB-202ENST00000381990 MAP2K6P52564 334 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 VSX2P58304 361 aaPredicted RBP8.25□□□□□ -1.09
GPNMB-202ENST00000381990 AP3S2P59780 193 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 ZP1P60852 638 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 TSPAN5P62079 268 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 BTN3A2P78410 334 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 MLLT1Q03111 559 aaPredicted RBP8.25□□□□□ -1.09
GPNMB-202ENST00000381990 FUT5Q11128 374 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 OPCMLQ14982 345 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 MAPK14Q16539 360 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 C3P1Q6ZMU1 363 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 NLRC3Q7RTR2 1065 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 CAMKVQ8NCB2 501 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 BBS1Q8NFJ9 593 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 ABHD4Q8TB40 342 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 BRIX1Q8TDN6 353 aaKnown RBP8.25□□□□□ -1.09
GPNMB-202ENST00000381990 SHDQ96IW2 340 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 TIMP4Q99727 224 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 IFT27Q9BW83 186 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 CHRDQ9H2X0 955 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 ZCCHC4Q9H5U6 513 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 SEMA4GQ9NTN9 838 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 COQ3Q9NZJ6 369 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 RPS6KB2Q9UBS0 482 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 PILRAQ9UKJ1 303 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 KCNMB2Q9Y691 235 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 SLCO1B1Q9Y6L6 691 aa8.25□□□□□ -1.09
GPNMB-202ENST00000381990 PRUNE2Q8WUY3 3088 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 A0A1B0GTQ1 180 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 OR6C65A6NJZ3 312 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 DVL2O14641 736 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 PPM1BO75688 479 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 CSNK2A2P19784 350 aaPredicted RBP8.24□□□□□ -1.09
GPNMB-202ENST00000381990 CD27P26842 260 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 BLVRAP53004 296 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 OR10A3P58181 314 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 STARD6P59095 220 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 PRR5P85299 388 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 RPL6Q02878 288 aaKnown RBP8.24□□□□□ -1.09
GPNMB-202ENST00000381990 CRYZQ08257 329 aaKnown RBP8.24□□□□□ -1.09
GPNMB-202ENST00000381990 TCTE1Q5JU00 501 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 ELFN2Q5R3F8 820 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 C18orf63Q68DL7 685 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 SGTBQ96EQ0 304 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 CNRIP1Q96F85 164 aaPredicted RBP8.24□□□□□ -1.09
GPNMB-202ENST00000381990 ZFYVE21Q9BQ24 234 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 REG4Q9BYZ8 158 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 PCED1AQ9H1Q7 454 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 LDAHQ9H6V9 325 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 NANSQ9NR45 359 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 HRASLS2Q9NWW9 162 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 SIRT4Q9Y6E7 314 aaPredicted RBP8.24□□□□□ -1.09
GPNMB-202ENST00000381990 A0A0J9YY10 115 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 CPSF4LA6NMK7 179 aaKnown RBP8.24□□□□□ -1.09
GPNMB-202ENST00000381990 METTL12A8MUP2 240 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 SOX1O00570 391 aaPredicted RBP8.24□□□□□ -1.09
GPNMB-202ENST00000381990 SOCS6O14544 535 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 ARL6IP5O75915 188 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 GIPP09681 153 aaPredicted RBP8.24□□□□□ -1.09
GPNMB-202ENST00000381990 SMIM10L1P0DMW3 83 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 NRG3P56975 720 aa8.24□□□□□ -1.09
GPNMB-202ENST00000381990 RAP2BP61225 183 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms