RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 ZNF546Q86UE3 836 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 DMBX1Q8NFW5 382 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 THAP6Q8TBB0 222 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 MCHR1Q99705 422 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 PDCD1LG2Q9BQ51 273 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 C1QTNF2Q9BXJ5 285 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 FKRPQ9H9S5 495 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 SPHK1Q9NYA1 384 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 SLC7A7Q9UM01 511 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 CASP8AP2Q9UKL3 1982 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 RFPL4AA6NLU0 287 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 RFPL4AL1F8VTS6 287 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 TBX19O60806 448 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 RNGTTO60942 597 aaKnown RBP13.83□□□□□ -0.2
CTNS-202ENST00000381870 SLC25A12O75746 678 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 CLTBP09497 229 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 RGS8P57771 180 aaPredicted RBP13.83□□□□□ -0.2
CTNS-202ENST00000381870 SNRPEP62304 92 aaKnown RBP13.83□□□□□ -0.2
CTNS-202ENST00000381870 PPIAP62937 165 aaKnown RBP13.83□□□□□ -0.2
CTNS-202ENST00000381870 RBMS2Q15434 407 aaKnown RBP13.83□□□□□ -0.2
CTNS-202ENST00000381870 AVPI1Q5T686 147 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 C11orf96Q7Z7L8 435 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 ARL14Q8N4G2 192 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 EID2Q8N6I1 236 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 PXYLP1Q8TE99 480 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 PPP1R16AQ96I34 528 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 FAM117AQ9C073 453 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 CHST6Q9GZX3 395 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 PIGMQ9H3S5 423 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 CACYBPQ9HB71 228 aaKnown RBP13.83□□□□□ -0.2
CTNS-202ENST00000381870 NOX4Q9NPH5 578 aa13.83□□□□□ -0.2
CTNS-202ENST00000381870 MKI67P46013 3256 aaKnown RBP13.82□□□□□ -0.2
CTNS-202ENST00000381870 A0A0C4DFX4 3053 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 MEX3AA1L020 520 aaKnown RBP13.82□□□□□ -0.2
CTNS-202ENST00000381870 SLC22A31A6NKX4 558 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 IFITM5A6NNB3 132 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 SULT1C2O00338 296 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 SYN1P17600 705 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 DCDP81605 110 aaKnown RBP13.82□□□□□ -0.2
CTNS-202ENST00000381870 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.82□□□□□ -0.2
CTNS-202ENST00000381870 CHST14Q8NCH0 376 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 OR9A1PQ8NGU1 263 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 CMTM3Q96MX0 182 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 PTDSS2Q9BVG9 487 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 SLC38A1Q9H2H9 487 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 ACSS1Q9NUB1 689 aaPredicted RBP13.82□□□□□ -0.2
CTNS-202ENST00000381870 ASF1BQ9NVP2 202 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 GPN3Q9UHW5 284 aaPredicted RBP13.82□□□□□ -0.2
CTNS-202ENST00000381870 FRMPD3Q5JV73 1810 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 FEZF1A0PJY2 475 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 UNC119BA6NIH7 251 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 ACOD1A6NK06 481 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 KIAA0355O15063 1070 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 TO15178 435 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 PPM1DO15297 605 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 PIN1P1O15428 100 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 EIF1BO60739 113 aaKnown RBP13.82□□□□□ -0.2
CTNS-202ENST00000381870 SNAPINO95295 136 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 PAK4O96013 591 aaPredicted RBP13.82□□□□□ -0.2
CTNS-202ENST00000381870 TMIGD3P0DMS9 266 aaPredicted RBP13.82□□□□□ -0.2
CTNS-202ENST00000381870 CTSAP10619 480 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 SRMP19623 302 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 MAKP20794 623 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 EIF1P41567 113 aaKnown RBP13.82□□□□□ -0.2
CTNS-202ENST00000381870 NPBWR1P48145 328 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 FKBP1BP68106 108 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 SRSF3P84103 164 aaKnown RBP13.82□□□□□ -0.2
CTNS-202ENST00000381870 CDK5R1Q15078 307 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 JMJD6Q6NYC1 403 aaPredicted RBP13.82□□□□□ -0.2
CTNS-202ENST00000381870 THSD4Q6ZMP0 1018 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 SPAG16Q8N0X2 631 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 GJD3Q8N144 294 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 ARMC10Q8N2F6 343 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 PFN4Q8NHR9 129 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 UBE2E3Q969T4 207 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 INTS12Q96CB8 462 aaKnown RBP13.82□□□□□ -0.2
CTNS-202ENST00000381870 SMIM19Q96E16 107 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 PELI1Q96FA3 418 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 S100A16Q96FQ6 103 aaKnown RBP13.82□□□□□ -0.2
CTNS-202ENST00000381870 PDCD10Q9BUL8 212 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 NIT2Q9NQR4 276 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 STARD7Q9NQZ5 370 aa13.82□□□□□ -0.2
CTNS-202ENST00000381870 NUP210Q8TEM1 1887 aaPredicted RBP13.82□□□□□ -0.2
CTNS-202ENST00000381870 ACOT7O00154 380 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 SYT5O00445 386 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 PRLHRP49683 370 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 IRF5Q13568 498 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 PWWP2BQ6NUJ5 590 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 UQCC3Q6UW78 93 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 FAM129CQ86XR2 697 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 OR4C16Q8NGL9 310 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 ZNF251Q9BRH9 671 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 GAREM1Q9H706 876 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 IL21RQ9HBE5 538 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 C20orf141Q9NUB4 165 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 C14orf105Q9NVL8 296 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 DHCR7Q9UBM7 475 aaKnown RBP13.81□□□□□ -0.2
CTNS-202ENST00000381870 OR5V1Q9UGF6 321 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 OR6C76A6NM76 312 aa13.81□□□□□ -0.2
CTNS-202ENST00000381870 SMAD9O15198 467 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms