RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 TRBV2A0A0J9YWF9 115 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 EDNRAP25101 427 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 NDUFAF7Q7L592 441 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 IL17RCQ8NAC3 791 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 FCAMRQ8WWV6 532 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 ATOH1Q92858 354 aaPredicted RBP12.8□□□□□ -0.36
SDC1-202ENST00000381150 ZNF304Q9HCX3 659 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 STON1Q9Y6Q2 735 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 WDR87Q6ZQQ6 2873 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 DOCK9Q9BZ29 2069 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 A0A1B0GVT2 93 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 GPR31O00270 319 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 VEGFDO43915 354 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 HMGN1P05114 100 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 TEAD1P28347 426 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 P2RY2P41231 377 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 GMFBP60983 142 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 PDSS1Q5T2R2 415 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 TFAP2EQ6VUC0 442 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 CBLN2Q8IUK8 224 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 ANKRD53Q8N9V6 530 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 ZNF784Q8NCA9 323 aaPredicted RBP12.8□□□□□ -0.36
SDC1-202ENST00000381150 ZNF485Q8NCK3 441 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 SMPDL3BQ92485 455 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 SLC41A3Q96GZ6 507 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 MICU1Q9BPX6 476 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 MENTQ9BUN1 341 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 SARGQ9BW04 601 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 ZNF471Q9BX82 626 aaPredicted RBP12.8□□□□□ -0.36
SDC1-202ENST00000381150 IFT22Q9H7X7 185 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 ZDHHC4Q9NPG8 344 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 FBXL3Q9UKT7 428 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 PCDHGA5Q9Y5G8 931 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 A0A0G2JPF8 293 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 HNRNPCL3B7ZW38 293 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 AIPO00170 330 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 KRT33AO76009 404 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 F12P00748 615 aaPredicted RBP12.8□□□□□ -0.36
SDC1-202ENST00000381150 HNRNPCL4P0DMR1 293 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 ERGP11308 486 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 PVALBP20472 110 aaPredicted RBP12.8□□□□□ -0.36
SDC1-202ENST00000381150 STAT5AP42229 794 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 TNFRSF17Q02223 184 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 C6orf132Q5T0Z8 1188 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 OR6K6Q8NGW6 343 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 PFN4Q8NHR9 129 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 PDCD10Q9BUL8 212 aa12.8□□□□□ -0.36
SDC1-202ENST00000381150 NKX6-2Q9C056 277 aaPredicted RBP12.8□□□□□ -0.36
SDC1-202ENST00000381150 TP53BP1Q12888 1972 aaPredicted RBP12.8□□□□□ -0.36
SDC1-202ENST00000381150 TRAV20A0A0B4J274 112 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 FAM86C2PA6NEL3 165 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 NFATC1O95644 943 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 LDOC1O95751 146 aaPredicted RBP12.79□□□□□ -0.36
SDC1-202ENST00000381150 EPXP11678 715 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 MAT2AP31153 395 aaKnown RBP12.79□□□□□ -0.36
SDC1-202ENST00000381150 MC3RP41968 323 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 PTH2RP49190 550 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 KHKP50053 298 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 MMP15P51511 669 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 C2orf68Q2NKX9 166 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 MEPCEQ7L2J0 689 aaKnown RBP12.79□□□□□ -0.36
SDC1-202ENST00000381150 SSX6Q7RTT6 188 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 DNAAF1Q8NEP3 725 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 CPNE2Q96FN4 548 aaPredicted RBP12.79□□□□□ -0.36
SDC1-202ENST00000381150 LGR4Q9BXB1 951 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 XKR8Q9H6D3 395 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 PRSS16Q9NQE7 514 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 PLSCR5A0PG75 271 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 PYCARD-AS1I3L0S3 204 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 BAMBIQ13145 260 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 LCTLQ6UWM7 567 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 NUDT13Q86X67 352 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 FAM98AQ8NCA5 519 aaKnown RBP12.79□□□□□ -0.36
SDC1-202ENST00000381150 OR13C2Q8NGS9 318 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 ADAMTS15Q8TE58 950 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 DVL3Q92997 716 aaPredicted RBP12.79□□□□□ -0.36
SDC1-202ENST00000381150 UBE2E3Q969T4 207 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 UBL7Q96S82 380 aaPredicted RBP12.79□□□□□ -0.36
SDC1-202ENST00000381150 CD180Q99467 661 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 HDAC8Q9BY41 377 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 KLHL9Q9P2J3 617 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 ENTPD4Q9Y227 616 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 OR2W5A6NFC9 320 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 RD3LP0DJH9 198 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 OMPP47874 163 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 RAP2BP61225 183 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 B2MP61769 119 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 KLF9Q13886 244 aaPredicted RBP12.79□□□□□ -0.36
SDC1-202ENST00000381150 CRMP1Q14194 572 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 SWI5Q1ZZU3 235 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 PSRC1Q6PGN9 363 aaPredicted RBP12.79□□□□□ -0.36
SDC1-202ENST00000381150 FRRS1Q6ZNA5 592 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 ZNF620Q6ZNG0 422 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 LINC00471Q8N535 108 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 OR4C6Q8NH72 309 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 SUN3Q8TAQ9 357 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 FGF13Q92913 245 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 SMARCD2Q92925 531 aa12.79□□□□□ -0.36
SDC1-202ENST00000381150 KCTD12Q96CX2 325 aaKnown RBP12.79□□□□□ -0.36
SDC1-202ENST00000381150 GLS2Q9UI32 602 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms