RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 TPK1Q9H3S4 243 aa15□□□□□ -0.01
HMGN1-203ENST00000380748 DYNLRB1Q9NP97 96 aa15□□□□□ -0.01
HMGN1-203ENST00000380748 ESM1Q9NQ30 184 aa15□□□□□ -0.01
HMGN1-203ENST00000380748 PARPBPQ9NWS1 579 aa15□□□□□ -0.01
HMGN1-203ENST00000380748 BAIAP2L1Q9UHR4 511 aa15□□□□□ -0.01
HMGN1-203ENST00000380748 HDGFL3Q9Y3E1 203 aa15□□□□□ -0.01
HMGN1-203ENST00000380748 LOC105371242A0A075B767 164 aa14.99□□□□□ -0.01
HMGN1-203ENST00000380748 TMEM129A0AVI4 362 aa14.99□□□□□ -0.01
HMGN1-203ENST00000380748 POC1B-GALNT4F8VUJ3 575 aa14.99□□□□□ -0.01
HMGN1-203ENST00000380748 SKAP2O75563 359 aaPredicted RBP14.99□□□□□ -0.01
HMGN1-203ENST00000380748 UBTFL6P0CB48 400 aaPredicted RBP14.99□□□□□ -0.01
HMGN1-203ENST00000380748 THBS4P35443 961 aa14.99□□□□□ -0.01
HMGN1-203ENST00000380748 TUBA1BP68363 451 aa14.99□□□□□ -0.01
HMGN1-203ENST00000380748 TUBA4AP68366 448 aa14.99□□□□□ -0.01
HMGN1-203ENST00000380748 H3F3AP84243 136 aa14.99□□□□□ -0.01
HMGN1-203ENST00000380748 TP53BP2Q13625 1128 aa14.99□□□□□ -0.01
HMGN1-203ENST00000380748 TBRG1Q3YBR2 411 aa14.99□□□□□ -0.01
HMGN1-203ENST00000380748 FAHD2BQ6P2I3 314 aaPredicted RBP14.99□□□□□ -0.01
HMGN1-203ENST00000380748 ANKRD16Q6P6B7 361 aa14.99□□□□□ -0.01
HMGN1-203ENST00000380748 TUBA1AQ71U36 451 aa14.99□□□□□ -0.01
HMGN1-203ENST00000380748 SPATA21Q7Z572 469 aa14.99□□□□□ -0.01
HMGN1-203ENST00000380748 SLC22A9Q8IVM8 553 aa14.99□□□□□ -0.01
HMGN1-203ENST00000380748 CDK20Q8IZL9 346 aa14.99□□□□□ -0.01
HMGN1-203ENST00000380748 FAHD2AQ96GK7 314 aa14.99□□□□□ -0.01
HMGN1-203ENST00000380748 FUT8Q9BYC5 575 aa14.99□□□□□ -0.01
HMGN1-203ENST00000380748 OBP2BQ9NPH6 170 aa14.99□□□□□ -0.01
HMGN1-203ENST00000380748 ZDHHC18Q9NUE0 388 aa14.99□□□□□ -0.01
HMGN1-203ENST00000380748 GPATCH2Q9NW75 528 aa14.99□□□□□ -0.01
HMGN1-203ENST00000380748 FBXO9Q9UK97 447 aaPredicted RBP14.99□□□□□ -0.01
HMGN1-203ENST00000380748 FAF1Q9UNN5 650 aaPredicted RBP14.99□□□□□ -0.01
HMGN1-203ENST00000380748 SPIN1Q9Y657 262 aaPredicted RBP14.99□□□□□ -0.01
HMGN1-203ENST00000380748 WNT9BO14905 357 aa14.98□□□□□ -0.01
HMGN1-203ENST00000380748 CRCPO75575 148 aa14.98□□□□□ -0.01
HMGN1-203ENST00000380748 CSTAP01040 98 aa14.98□□□□□ -0.01
HMGN1-203ENST00000380748 AVPP01185 164 aa14.98□□□□□ -0.01
HMGN1-203ENST00000380748 CCNA2P20248 432 aa14.98□□□□□ -0.01
HMGN1-203ENST00000380748 PRPH2P23942 346 aa14.98□□□□□ -0.01
HMGN1-203ENST00000380748 APOBEC1P41238 236 aaKnown RBP14.98□□□□□ -0.01
HMGN1-203ENST00000380748 SLC17A1Q14916 467 aa14.98□□□□□ -0.01
HMGN1-203ENST00000380748 GPR68Q15743 365 aa14.98□□□□□ -0.01
HMGN1-203ENST00000380748 OLIG3Q7RTU3 272 aa14.98□□□□□ -0.01
HMGN1-203ENST00000380748 ZDHHC22Q8N966 263 aa14.98□□□□□ -0.01
HMGN1-203ENST00000380748 NUP37Q8NFH4 326 aa14.98□□□□□ -0.01
HMGN1-203ENST00000380748 OR4F15Q8NGB8 312 aa14.98□□□□□ -0.01
HMGN1-203ENST00000380748 OR5D16Q8NGK9 328 aa14.98□□□□□ -0.01
HMGN1-203ENST00000380748 MRPL24Q96A35 216 aaKnown RBP14.98□□□□□ -0.01
HMGN1-203ENST00000380748 BOD1Q96IK1 185 aa14.98□□□□□ -0.01
HMGN1-203ENST00000380748 FCRL1Q96LA6 429 aa14.98□□□□□ -0.01
HMGN1-203ENST00000380748 SDF2Q99470 211 aa14.98□□□□□ -0.01
HMGN1-203ENST00000380748 SLC6A7Q99884 636 aa14.98□□□□□ -0.01
HMGN1-203ENST00000380748 ZNF442Q9H7R0 627 aa14.98□□□□□ -0.01
HMGN1-203ENST00000380748 C1orf109Q9NX04 203 aa14.98□□□□□ -0.01
HMGN1-203ENST00000380748 NUP214P35658 2090 aaPredicted RBP14.97□□□□□ -0.01
HMGN1-203ENST00000380748 NR5A2O00482 541 aa14.97□□□□□ -0.01
HMGN1-203ENST00000380748 BCAS1O75363 584 aaPredicted RBP14.97□□□□□ -0.01
HMGN1-203ENST00000380748 LGI1O95970 557 aa14.97□□□□□ -0.01
HMGN1-203ENST00000380748 ADRA2AP08913 450 aa14.97□□□□□ -0.01
HMGN1-203ENST00000380748 SAGP10523 405 aaPredicted RBP14.97□□□□□ -0.01
HMGN1-203ENST00000380748 NPR2P20594 1047 aa14.97□□□□□ -0.01
HMGN1-203ENST00000380748 CCT3P49368 545 aaKnown RBP14.97□□□□□ -0.01
HMGN1-203ENST00000380748 MYPOPQ86VE0 399 aaPredicted RBP14.97□□□□□ -0.01
HMGN1-203ENST00000380748 LRRC17Q8N6Y2 441 aa14.97□□□□□ -0.01
HMGN1-203ENST00000380748 OR1K1Q8NGR3 316 aa14.97□□□□□ -0.01
HMGN1-203ENST00000380748 OR51F2Q8NH61 342 aa14.97□□□□□ -0.01
HMGN1-203ENST00000380748 CKAP2Q8WWK9 683 aa14.97□□□□□ -0.01
HMGN1-203ENST00000380748 METTL2AQ96IZ6 378 aaKnown RBP14.97□□□□□ -0.01
HMGN1-203ENST00000380748 OR7D2Q96RA2 312 aa14.97□□□□□ -0.01
HMGN1-203ENST00000380748 NMUR2Q9GZQ4 415 aa14.97□□□□□ -0.01
HMGN1-203ENST00000380748 RACGAP1Q9H0H5 632 aa14.97□□□□□ -0.01
HMGN1-203ENST00000380748 CDC42EP4Q9H3Q1 356 aaKnown RBP14.97□□□□□ -0.01
HMGN1-203ENST00000380748 TREM2Q9NZC2 230 aa14.97□□□□□ -0.01
HMGN1-203ENST00000380748 TMEM181Q9P2C4 612 aa14.97□□□□□ -0.01
HMGN1-203ENST00000380748 CRNNQ9UBG3 495 aaPredicted RBP14.97□□□□□ -0.01
HMGN1-203ENST00000380748 ZNF180Q9UJW8 692 aa14.97□□□□□ -0.01
HMGN1-203ENST00000380748 URI1O94763 535 aaPredicted RBP14.96□□□□□ -0.01
HMGN1-203ENST00000380748 PNPP00491 289 aa14.96□□□□□ -0.01
HMGN1-203ENST00000380748 IGLV1-44P01699 117 aa14.96□□□□□ -0.01
HMGN1-203ENST00000380748 KRT16P08779 473 aa14.96□□□□□ -0.01
HMGN1-203ENST00000380748 CELA3BP08861 270 aa14.96□□□□□ -0.01
HMGN1-203ENST00000380748 GAAP10253 952 aa14.96□□□□□ -0.01
HMGN1-203ENST00000380748 GPR6P46095 362 aaPredicted RBP14.96□□□□□ -0.01
HMGN1-203ENST00000380748 UBE2NP61088 152 aaKnown RBP14.96□□□□□ -0.01
HMGN1-203ENST00000380748 RPL38P63173 70 aaKnown RBP14.96□□□□□ -0.01
HMGN1-203ENST00000380748 ZNF141Q15928 474 aa14.96□□□□□ -0.01
HMGN1-203ENST00000380748 ELFN2Q5R3F8 820 aa14.96□□□□□ -0.01
HMGN1-203ENST00000380748 AAED1Q7RTV5 226 aa14.96□□□□□ -0.01
HMGN1-203ENST00000380748 ADGRG3Q86Y34 549 aa14.96□□□□□ -0.01
HMGN1-203ENST00000380748 ZIC4Q8N9L1 334 aa14.96□□□□□ -0.01
HMGN1-203ENST00000380748 POMGNT2Q8NAT1 580 aa14.96□□□□□ -0.01
HMGN1-203ENST00000380748 OR56A1Q8NGH5 318 aa14.96□□□□□ -0.01
HMGN1-203ENST00000380748 OR2T11Q8NH01 316 aa14.96□□□□□ -0.01
HMGN1-203ENST00000380748 ZNF563Q8TA94 476 aa14.96□□□□□ -0.01
HMGN1-203ENST00000380748 TMEM45BQ96B21 275 aa14.96□□□□□ -0.01
HMGN1-203ENST00000380748 AURKBQ96GD4 344 aaPredicted RBP14.96□□□□□ -0.01
HMGN1-203ENST00000380748 ZNF385AQ96PM9 386 aaKnown RBP14.96□□□□□ -0.01
HMGN1-203ENST00000380748 SUCNR1Q9BXA5 334 aa14.96□□□□□ -0.01
HMGN1-203ENST00000380748 TMEM45AQ9NWC5 275 aa14.96□□□□□ -0.01
HMGN1-203ENST00000380748 TRAPPC4Q9Y296 219 aa14.96□□□□□ -0.01
HMGN1-203ENST00000380748 ANKRD28O15084 1053 aa14.95□□□□□ -0.02
HMGN1-203ENST00000380748 FCMRO60667 390 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms