RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 C1QL3Q5VWW1 255 aa11.38□□□□□ -0.59
SMN1-202ENST00000380707 ZNF585AQ6P3V2 769 aa11.38□□□□□ -0.59
SMN1-202ENST00000380707 C3P1Q6ZMU1 363 aa11.38□□□□□ -0.59
SMN1-202ENST00000380707 ESPNLQ6ZVH7 1005 aa11.38□□□□□ -0.59
SMN1-202ENST00000380707 PIWIL3Q7Z3Z3 882 aaKnown RBP11.38□□□□□ -0.59
SMN1-202ENST00000380707 ZNF605Q86T29 641 aa11.38□□□□□ -0.59
SMN1-202ENST00000380707 CYP4Z1Q86W10 505 aa11.38□□□□□ -0.59
SMN1-202ENST00000380707 NKAIN4Q8IVV8 208 aa11.38□□□□□ -0.59
SMN1-202ENST00000380707 PM20D2Q8IYS1 436 aa11.38□□□□□ -0.59
SMN1-202ENST00000380707 MEIOBQ8N635 442 aa11.38□□□□□ -0.59
SMN1-202ENST00000380707 SLC25A43Q8WUT9 341 aaPredicted RBP11.38□□□□□ -0.59
SMN1-202ENST00000380707 SLCO4A1Q96BD0 722 aa11.38□□□□□ -0.59
SMN1-202ENST00000380707 DDIT4LQ96D03 193 aa11.38□□□□□ -0.59
SMN1-202ENST00000380707 KLHL15Q96M94 604 aa11.38□□□□□ -0.59
SMN1-202ENST00000380707 OR5B2Q96R09 309 aa11.38□□□□□ -0.59
SMN1-202ENST00000380707 TUBA1CQ9BQE3 449 aa11.38□□□□□ -0.59
SMN1-202ENST00000380707 FNDC11Q9BVV2 318 aa11.38□□□□□ -0.59
SMN1-202ENST00000380707 COQ10BQ9H8M1 238 aa11.38□□□□□ -0.59
SMN1-202ENST00000380707 NMNAT1Q9HAN9 279 aaPredicted RBP11.38□□□□□ -0.59
SMN1-202ENST00000380707 MAN2C1Q9NTJ4 1040 aa11.38□□□□□ -0.59
SMN1-202ENST00000380707 AURKCQ9UQB9 309 aa11.38□□□□□ -0.59
SMN1-202ENST00000380707 FAM32AQ9Y421 112 aaKnown RBP11.38□□□□□ -0.59
SMN1-202ENST00000380707 KDM4EB2RXH2 506 aaPredicted RBP11.37□□□□□ -0.59
SMN1-202ENST00000380707 H0Y3Z8 333 aa11.37□□□□□ -0.59
SMN1-202ENST00000380707 NPIPB7O75200 414 aa11.37□□□□□ -0.59
SMN1-202ENST00000380707 THRBP10828 461 aa11.37□□□□□ -0.59
SMN1-202ENST00000380707 SLC7A1P30825 629 aa11.37□□□□□ -0.59
SMN1-202ENST00000380707 EIF1AXP47813 144 aaKnown RBP11.37□□□□□ -0.59
SMN1-202ENST00000380707 CLK1P49759 484 aaKnown RBP11.37□□□□□ -0.59
SMN1-202ENST00000380707 ACTR3P61158 418 aa11.37□□□□□ -0.59
SMN1-202ENST00000380707 ST3GAL3Q11203 375 aa11.37□□□□□ -0.59
SMN1-202ENST00000380707 MYBPHQ13203 477 aa11.37□□□□□ -0.59
SMN1-202ENST00000380707 KPNB1Q14974 876 aaKnown RBP11.37□□□□□ -0.59
SMN1-202ENST00000380707 HBMQ6B0K9 141 aa11.37□□□□□ -0.59
SMN1-202ENST00000380707 RTL6Q6ICC9 239 aa11.37□□□□□ -0.59
SMN1-202ENST00000380707 PLXDC2Q6UX71 529 aa11.37□□□□□ -0.59
SMN1-202ENST00000380707 ATCAYQ86WG3 371 aa11.37□□□□□ -0.59
SMN1-202ENST00000380707 OFCC1Q8IZS5 231 aa11.37□□□□□ -0.59
SMN1-202ENST00000380707 OR10D3Q8NH80 312 aa11.37□□□□□ -0.59
SMN1-202ENST00000380707 OR2V1Q8NHB1 315 aa11.37□□□□□ -0.59
SMN1-202ENST00000380707 ZPLD1Q8TCW7 415 aa11.37□□□□□ -0.59
SMN1-202ENST00000380707 TMEM255BQ8WV15 326 aa11.37□□□□□ -0.59
SMN1-202ENST00000380707 ZNF845Q96IR2 970 aaPredicted RBP11.37□□□□□ -0.59
SMN1-202ENST00000380707 MPP4Q96JB8 637 aa11.37□□□□□ -0.59
SMN1-202ENST00000380707 PIP5K1AQ99755 562 aa11.37□□□□□ -0.59
SMN1-202ENST00000380707 ZNF426Q9BUY5 554 aa11.37□□□□□ -0.59
SMN1-202ENST00000380707 CHID1Q9BWS9 393 aa11.37□□□□□ -0.59
SMN1-202ENST00000380707 DENND2DQ9H6A0 471 aaPredicted RBP11.37□□□□□ -0.59
SMN1-202ENST00000380707 CCM2LQ9NUG4 571 aaPredicted RBP11.37□□□□□ -0.59
SMN1-202ENST00000380707 SH3BGRL2Q9UJC5 107 aa11.37□□□□□ -0.59
SMN1-202ENST00000380707 AHRRA9YTQ3 701 aa11.36□□□□□ -0.59
SMN1-202ENST00000380707 PYCARD-AS1I3L0S3 204 aa11.36□□□□□ -0.59
SMN1-202ENST00000380707 IMPDH2P12268 514 aa11.36□□□□□ -0.59
SMN1-202ENST00000380707 IFNA8P32881 189 aa11.36□□□□□ -0.59
SMN1-202ENST00000380707 DIO1P49895 249 aa11.36□□□□□ -0.59
SMN1-202ENST00000380707 CARD18P57730 90 aa11.36□□□□□ -0.59
SMN1-202ENST00000380707 C1orf140Q5VVS0 124 aa11.36□□□□□ -0.59
SMN1-202ENST00000380707 TMPPEQ6ZT21 453 aa11.36□□□□□ -0.59
SMN1-202ENST00000380707 ADGRE4PQ86SQ3 457 aa11.36□□□□□ -0.59
SMN1-202ENST00000380707 RPRMLQ8N4K4 120 aa11.36□□□□□ -0.59
SMN1-202ENST00000380707 PIK3C3Q8NEB9 887 aa11.36□□□□□ -0.59
SMN1-202ENST00000380707 OR52J3Q8NH60 311 aa11.36□□□□□ -0.59
SMN1-202ENST00000380707 STK35Q8TDR2 534 aa11.36□□□□□ -0.59
SMN1-202ENST00000380707 OSTF1Q92882 214 aa11.36□□□□□ -0.59
SMN1-202ENST00000380707 TAAR8Q969N4 342 aa11.36□□□□□ -0.59
SMN1-202ENST00000380707 KTI12Q96EK9 354 aaPredicted RBP11.36□□□□□ -0.59
SMN1-202ENST00000380707 RSRC1Q96IZ7 334 aaKnown RBP11.36□□□□□ -0.59
SMN1-202ENST00000380707 ZNF347Q96SE7 839 aa11.36□□□□□ -0.59
SMN1-202ENST00000380707 TMEM43Q9BTV4 400 aa11.36□□□□□ -0.59
SMN1-202ENST00000380707 SRXN1Q9BYN0 137 aa11.36□□□□□ -0.59
SMN1-202ENST00000380707 POTEKPQ9BYX7 375 aa11.36□□□□□ -0.59
SMN1-202ENST00000380707 HDGFL3Q9Y3E1 203 aa11.36□□□□□ -0.59
SMN1-202ENST00000380707 TESMINQ9Y4I5 508 aa11.36□□□□□ -0.59
SMN1-202ENST00000380707 FAM215AQ9Y5M1 114 aa11.36□□□□□ -0.59
SMN1-202ENST00000380707 HELZ2Q9BYK8 2649 aaKnown RBP11.35□□□□□ -0.59
SMN1-202ENST00000380707 TRGV8A0A0C4DH27 118 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 A0A1W2PRQ8 180 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 FIGNL2A6NMB9 653 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 CLCA1A8K7I4 914 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 SULT2B1O00204 365 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 CXCL13O43927 109 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 WDR1O75083 606 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 H1F0P07305 194 aaKnown RBP11.35□□□□□ -0.59
SMN1-202ENST00000380707 STSP08842 583 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 GABRA1P14867 456 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 ACVR2AP27037 513 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 CA7P43166 264 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 RPS5P46782 204 aaKnown RBP11.35□□□□□ -0.59
SMN1-202ENST00000380707 LSM11P83369 360 aaKnown RBP eCLIP11.35□□□□□ -0.59
SMN1-202ENST00000380707 DGCR6Q14129 220 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 TRAM2Q15035 370 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 ACSF3Q4G176 576 aaPredicted RBP11.35□□□□□ -0.59
SMN1-202ENST00000380707 TTC33Q6PID6 262 aaPredicted RBP11.35□□□□□ -0.59
SMN1-202ENST00000380707 RPTNQ6XPR3 784 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 PAPD5Q8NDF8 572 aaKnown RBP11.35□□□□□ -0.59
SMN1-202ENST00000380707 PRR7Q8TB68 274 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 SLC7A13Q8TCU3 470 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 TMEM239Q8WW34 195 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 DHRS1Q96LJ7 313 aa11.35□□□□□ -0.59
SMN1-202ENST00000380707 TRIB1Q96RU8 372 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms