RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 NGFRP08138 427 aa19.76■□□□□ 0.75
TRIM54-202ENST00000380075 SBK2P0C263 348 aa19.76■□□□□ 0.75
TRIM54-202ENST00000380075 ZNF883P0CG24 379 aa19.76■□□□□ 0.75
TRIM54-202ENST00000380075 FHL1Q13642 323 aa19.76■□□□□ 0.75
TRIM54-202ENST00000380075 VASNQ6EMK4 673 aa19.76■□□□□ 0.75
TRIM54-202ENST00000380075 DESI1Q6ICB0 168 aa19.76■□□□□ 0.75
TRIM54-202ENST00000380075 CCBE1Q6UXH8 406 aaPredicted RBP19.76■□□□□ 0.75
TRIM54-202ENST00000380075 TMEM99Q8N816 258 aa19.76■□□□□ 0.75
TRIM54-202ENST00000380075 ZNF527Q8NB42 609 aa19.76■□□□□ 0.75
TRIM54-202ENST00000380075 CHAC2Q8WUX2 184 aa19.76■□□□□ 0.75
TRIM54-202ENST00000380075 TP53BP1Q12888 1972 aaPredicted RBP19.76■□□□□ 0.75
TRIM54-202ENST00000380075 DYRK3O43781 588 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 TDRD6O60522 2096 aaKnown RBP19.75■□□□□ 0.75
TRIM54-202ENST00000380075 IGF2P01344 180 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 TGM4P49221 684 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 CRMP1Q14194 572 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 DEFB133Q30KQ1 61 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 STPG1Q5TH74 334 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 FAM131AQ6UXB0 335 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 ZBTB8BQ8NAP8 495 aaPredicted RBP19.75■□□□□ 0.75
TRIM54-202ENST00000380075 DIRAS2Q96HU8 199 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 HDHD5Q9BXW7 423 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 SPRTNQ9H040 489 aaPredicted RBP19.75■□□□□ 0.75
TRIM54-202ENST00000380075 OR51V1Q9H2C8 321 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 C14orf119Q9NWQ9 140 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 LRIT1Q9P2V4 623 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 PTPRZ1P23471 2315 aaPredicted RBP19.75■□□□□ 0.75
TRIM54-202ENST00000380075 FABP12A6NFH5 140 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 TMEM150CB9EJG8 249 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 SNPHO15079 494 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 CLPSP04118 112 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 GIMD1P0DJR0 217 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 F8A1P23610 371 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 PTBP1P26599 531 aaKnown RBP eCLIP19.75■□□□□ 0.75
TRIM54-202ENST00000380075 KLHL26Q53HC5 615 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 MZT2AQ6P582 158 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 METAP1DQ6UB28 335 aaPredicted RBP19.75■□□□□ 0.75
TRIM54-202ENST00000380075 FAM71CQ8NEG0 241 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 OR10H4Q8NGA5 316 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 FAM122AQ96E09 287 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 ADGRL4Q9HBW9 690 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 TBC1D24Q9ULP9 559 aa19.75■□□□□ 0.75
TRIM54-202ENST00000380075 TMEM184BQ9Y519 407 aaPredicted RBP19.75■□□□□ 0.75
TRIM54-202ENST00000380075 C17orf105B2RV13 164 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 GTPBP1O00178 669 aaKnown RBP19.74■□□□□ 0.75
TRIM54-202ENST00000380075 LRRTM2O43300 516 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 MTNR1BP49286 362 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 SCN1BQ07699 218 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 OR4C3Q8NH37 302 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 AHCYL2Q96HN2 611 aaKnown RBP19.74■□□□□ 0.75
TRIM54-202ENST00000380075 SLC46A1Q96NT5 459 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 TIMP4Q99727 224 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 ISG20L2Q9H9L3 353 aaKnown RBP19.74■□□□□ 0.75
TRIM54-202ENST00000380075 UBQLN4Q9NRR5 601 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 LANCL2Q9NS86 450 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 CUTCQ9NTM9 273 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 CHRNA9Q9UGM1 479 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 ZC3H12DA2A288 527 aaKnown RBP19.74■□□□□ 0.75
TRIM54-202ENST00000380075 IL7P13232 177 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 CD59P13987 128 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 SPNP16150 400 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 PPICP45877 212 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 SLC16A1P53985 500 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 ISXQ2M1V0 245 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 B3GLCTQ6Y288 498 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 DBX2Q6ZNG2 339 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 METTL27Q8N6F8 245 aaPredicted RBP19.74■□□□□ 0.75
TRIM54-202ENST00000380075 ACOT12Q8WYK0 555 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 HPS1Q92902 700 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 EXOSC3Q9NQT5 275 aaKnown RBP19.74■□□□□ 0.75
TRIM54-202ENST00000380075 MRTO4Q9UKD2 239 aaKnown RBP19.74■□□□□ 0.75
TRIM54-202ENST00000380075 ADAM30Q9UKF2 790 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 GRIP1Q9Y3R0 1128 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 NOX1Q9Y5S8 564 aa19.74■□□□□ 0.75
TRIM54-202ENST00000380075 SEC14L5O43304 696 aa19.73■□□□□ 0.75
TRIM54-202ENST00000380075 IL33O95760 270 aa19.73■□□□□ 0.75
TRIM54-202ENST00000380075 NNATQ16517 81 aa19.73■□□□□ 0.75
TRIM54-202ENST00000380075 DPY19L2P2Q6ZN68 376 aa19.73■□□□□ 0.75
TRIM54-202ENST00000380075 TMEM91Q6ZNR0 172 aa19.73■□□□□ 0.75
TRIM54-202ENST00000380075 OR5W2Q8NH69 310 aa19.73■□□□□ 0.75
TRIM54-202ENST00000380075 ARSGQ96EG1 525 aa19.73■□□□□ 0.75
TRIM54-202ENST00000380075 SENP5Q96HI0 755 aaPredicted RBP19.73■□□□□ 0.75
TRIM54-202ENST00000380075 ERMAPQ96PL5 475 aaPredicted RBP19.73■□□□□ 0.75
TRIM54-202ENST00000380075 ZNF337Q9Y3M9 751 aa19.73■□□□□ 0.75
TRIM54-202ENST00000380075 SPEGQ15772 3267 aa19.73■□□□□ 0.75
TRIM54-202ENST00000380075 SYNDIG1LA6NDD5 238 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 H3BMH7 237 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 PLPP2O43688 288 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 REM1O75628 298 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 OR2B3O76000 313 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 PNMTP11086 282 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 LCN1P31025 176 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 PLA2G5P39877 138 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 EIF2B2P49770 351 aaKnown RBP19.72■□□□□ 0.75
TRIM54-202ENST00000380075 HSD11B2P80365 405 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 LCN1P1Q5VSP4 162 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 EID2Q8N6I1 236 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 POMGNT2Q8NAT1 580 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 SMPDL3BQ92485 455 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 NPAP1Q9NZP6 1156 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms