RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 PROX1Q92786 737 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 MBD6Q96DN6 1003 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 C7orf34Q96L11 122 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 DACH2Q96NX9 599 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 PKP2Q99959 881 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 PIGMQ9H3S5 423 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 EVA1AQ9H8M9 152 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 NDRG3Q9UGV2 375 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 MPDZO75970 2070 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 NPIPB9F8W1W9 429 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 SEC14L5O43304 696 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 DEAF1O75398 565 aaPredicted RBP12.37□□□□□ -0.43
PRPF18-202ENST00000378572 IGKV1D-16P01601 117 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 FABP3P05413 133 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 LHX2P50458 406 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 SIRPAP78324 504 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 LARS2Q15031 903 aaKnown RBP12.37□□□□□ -0.43
PRPF18-202ENST00000378572 ZSWIM7Q19AV6 140 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 IQCCQ4KMZ1 466 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 ZNF311Q5JNZ3 666 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 ZDHHC21Q8IVQ6 265 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 LRTOMTQ8WZ04 291 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 ZG16BQ96DA0 208 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 RSPO3Q9BXY4 272 aaPredicted RBP12.37□□□□□ -0.43
PRPF18-202ENST00000378572 HOXD1Q9GZZ0 328 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 FBXO34Q9NWN3 711 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 JKAMPQ9P055 326 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 CLCF1Q9UBD9 225 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 ZNF232Q9UNY5 417 aa12.37□□□□□ -0.43
PRPF18-202ENST00000378572 FLNAP21333 2647 aaKnown RBP12.36□□□□□ -0.43
PRPF18-202ENST00000378572 SLC22A20A6NK97 555 aa12.36□□□□□ -0.43
PRPF18-202ENST00000378572 TPST1O60507 370 aa12.36□□□□□ -0.43
PRPF18-202ENST00000378572 UGT2B17O75795 530 aa12.36□□□□□ -0.43
PRPF18-202ENST00000378572 PRSS23O95084 383 aa12.36□□□□□ -0.43
PRPF18-202ENST00000378572 GOSR1O95249 250 aa12.36□□□□□ -0.43
PRPF18-202ENST00000378572 LGI1O95970 557 aa12.36□□□□□ -0.43
PRPF18-202ENST00000378572 ITGA2P17301 1181 aa12.36□□□□□ -0.43
PRPF18-202ENST00000378572 CHMP24386 653 aa12.36□□□□□ -0.43
PRPF18-202ENST00000378572 GFRA1P56159 465 aa12.36□□□□□ -0.43
PRPF18-202ENST00000378572 VLDLRP98155 873 aa12.36□□□□□ -0.43
PRPF18-202ENST00000378572 GPR68Q15743 365 aa12.36□□□□□ -0.43
PRPF18-202ENST00000378572 ZNF141Q15928 474 aa12.36□□□□□ -0.43
PRPF18-202ENST00000378572 LIN52Q52LA3 116 aa12.36□□□□□ -0.43
PRPF18-202ENST00000378572 RNF220Q5VTB9 566 aa12.36□□□□□ -0.43
PRPF18-202ENST00000378572 HMBOX1Q6NT76 420 aa12.36□□□□□ -0.43
PRPF18-202ENST00000378572 MEIOBQ8N635 442 aa12.36□□□□□ -0.43
PRPF18-202ENST00000378572 WFDC11Q8NEX6 87 aa12.36□□□□□ -0.43
PRPF18-202ENST00000378572 SMPDL3BQ92485 455 aa12.36□□□□□ -0.43
PRPF18-202ENST00000378572 CENPNQ96H22 339 aaPredicted RBP12.36□□□□□ -0.43
PRPF18-202ENST00000378572 BDH2Q9BUT1 245 aa12.36□□□□□ -0.43
PRPF18-202ENST00000378572 QRSL1Q9H0R6 528 aaKnown RBP12.36□□□□□ -0.43
PRPF18-202ENST00000378572 DNAJB9Q9UBS3 223 aa12.36□□□□□ -0.43
PRPF18-202ENST00000378572 ZNF443Q9Y2A4 671 aaPredicted RBP12.36□□□□□ -0.43
PRPF18-202ENST00000378572 ACANP16112 2415 aa12.36□□□□□ -0.43
PRPF18-202ENST00000378572 A0A1W2PNV4 684 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 C17orf51A8MQB3 221 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 CLOCKO15516 846 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 TSPAN2O60636 221 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 HRGP04196 525 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 IFNW1P05000 195 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 NID1P14543 1247 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 IL7RP16871 459 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 HK1P19367 917 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 EVI2BP34910 448 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 PNLIPRP2P54317 469 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 ATP12AP54707 1039 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 CLDN18P56856 261 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 EEF1A1P68104 462 aaKnown RBP12.35□□□□□ -0.43
PRPF18-202ENST00000378572 NRF1Q16656 503 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 KRTAP21-3Q3LHN1 58 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 EEF1A1P5Q5VTE0 462 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 Q71RC1 249 aaPredicted RBP12.35□□□□□ -0.43
PRPF18-202ENST00000378572 ZAR1Q86SH2 424 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 VRK2Q86Y07 508 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 SLC35B4Q969S0 331 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 ZNF347Q96SE7 839 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 ARHGDIGQ99819 225 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 DSN1Q9H410 356 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 PLEKHF2Q9H8W4 249 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 KLHL28Q9NXS3 571 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 KCNE5Q9UJ90 142 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 SLC9A8Q9Y2E8 581 aa12.35□□□□□ -0.43
PRPF18-202ENST00000378572 H3BML4 177 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 GMFGO60234 142 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 TGM6O95932 706 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 CST1P01037 141 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 NGFRP08138 427 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 ZNF708P17019 499 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 PTDSS1P48651 473 aaKnown RBP12.34□□□□□ -0.43
PRPF18-202ENST00000378572 CLK3P49761 638 aaKnown RBP12.34□□□□□ -0.43
PRPF18-202ENST00000378572 DSCR4P56555 118 aaPredicted RBP12.34□□□□□ -0.43
PRPF18-202ENST00000378572 SESN3P58005 492 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 MAPK14Q16539 360 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 OR2A2Q6IF42 318 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 ZNF836Q6ZNA1 936 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 CMIPQ8IY22 773 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 NTNG2Q96CW9 530 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 ZNF300Q96RE9 604 aaPredicted RBP12.34□□□□□ -0.43
PRPF18-202ENST00000378572 MED18Q9BUE0 208 aa12.34□□□□□ -0.43
PRPF18-202ENST00000378572 ARMC7Q9H6L4 198 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms