RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 ASAH1Q13510 395 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 ZDHHC14Q8IZN3 488 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 ARFGAP1Q8N6T3 406 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 SMIM7Q9BQ49 75 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 TTTY10Q9BZA0 68 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 AGPAT4Q9NRZ5 378 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 ALKBH4Q9NXW9 302 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 FAM53CQ9NYF3 392 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 RAB22AQ9UL26 194 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 PADI3Q9ULW8 664 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 LILRB3O75022 631 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 CATSPERDQ86XM0 798 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 CHST14Q8NCH0 376 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 OR2G2Q8NGZ5 317 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 PHYHIPQ92561 330 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 MAP6Q96JE9 813 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 HSPB8Q9UJY1 196 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 TSPAN6O43657 245 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 MAFO75444 373 aaPredicted RBP8.22□□□□□ -1.09
LIG3-202ENST00000378526 QDPRP09417 244 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 CNR2P34972 360 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 CARD18P57730 90 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 ZNF66Q6ZN08 573 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 ATP5SQ99766 215 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 FDXACB1Q9BRP7 624 aaPredicted RBP8.22□□□□□ -1.09
LIG3-202ENST00000378526 ACTR3CQ9C0K3 210 aaPredicted RBP8.22□□□□□ -1.09
LIG3-202ENST00000378526 XYLT2Q9H1B5 865 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 MTCH1Q9NZJ7 389 aa8.22□□□□□ -1.09
LIG3-202ENST00000378526 OR5K4A6NMS3 321 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 MANBAO00462 879 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 UGDHO60701 494 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 POP4O95707 220 aaKnown RBP8.21□□□□□ -1.09
LIG3-202ENST00000378526 OMGP23515 440 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 DPP4P27487 766 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 L1CAMP32004 1257 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 MMP15P51511 669 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 SMAD3P84022 425 aaKnown RBP8.21□□□□□ -1.09
LIG3-202ENST00000378526 SLC35B4Q969S0 331 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 GPR31O00270 319 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 WNT7AO00755 349 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 MPIG6BO95866 241 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 C6orf47O95873 294 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 OR12D1P0DN82 309 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 AGXTP21549 392 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 EMX1Q04741 257 aaPredicted RBP8.21□□□□□ -1.09
LIG3-202ENST00000378526 TECPR1Q7Z6L1 1165 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 PIGZQ86VD9 579 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 APCDD1Q8J025 514 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 ELOVL1Q9BW60 279 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 MAP1LC3CQ9BXW4 147 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 CD244Q9BZW8 370 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 NOCTQ9UK39 431 aaKnown RBP8.21□□□□□ -1.09
LIG3-202ENST00000378526 NACAE9PAV3 2078 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 TRABD2BA6NFA1 517 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 A8MU76 341 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 SLC17A3O00476 420 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 RGS13O14921 159 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 B4GALT4O60513 344 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 LMX1BO60663 402 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 SMIM17P0DL12 118 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 TCN2P20062 427 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 ADRA1BP35368 520 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 PLGLB1Q02325 96 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 OR4A16Q8NH70 328 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 PXYLP1Q8TE99 480 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 SLC46A1Q96NT5 459 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 CIB3Q96Q77 187 aaPredicted RBP8.21□□□□□ -1.09
LIG3-202ENST00000378526 PEBP4Q96S96 227 aa8.21□□□□□ -1.09
LIG3-202ENST00000378526 TMEM212A6NML5 194 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 DBX1A6NMT0 343 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 LRCH4O75427 683 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 SLITRK3O94933 977 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 CLDN1O95832 211 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 KCNJ3P48549 501 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 HLXQ14774 488 aaPredicted RBP8.21□□□□□ -1.1
LIG3-202ENST00000378526 TOMM34Q15785 309 aaPredicted RBP8.21□□□□□ -1.1
LIG3-202ENST00000378526 DND1Q8IYX4 353 aaKnown RBP8.21□□□□□ -1.1
LIG3-202ENST00000378526 NECAP1Q8NC96 275 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 METTL7AQ9H8H3 244 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 SLC6A20Q9NP91 592 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 SLC23A2Q9UGH3 650 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 CAMK2AQ9UQM7 478 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 WDR1O75083 606 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 RECQL4O94761 1208 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 C1RP00736 705 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 ADH4P08319 380 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 BMP4P12644 408 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 VIPR1P32241 457 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 HGSNATQ68CP4 663 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 C12orf54Q6X4T0 127 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 NRMQ8IXM6 262 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 CADM3Q8N126 398 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 CISD2Q8N5K1 135 aaKnown RBP8.21□□□□□ -1.1
LIG3-202ENST00000378526 ZFP41Q8N8Y5 198 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 NETO2Q8NC67 525 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 SAT2Q96F10 170 aaPredicted RBP8.21□□□□□ -1.1
LIG3-202ENST00000378526 RBM14Q96PK6 669 aaKnown RBP8.21□□□□□ -1.1
LIG3-202ENST00000378526 TAAR9Q96RI9 348 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 RANBP9Q96S59 729 aa8.21□□□□□ -1.1
LIG3-202ENST00000378526 PTPN18Q99952 460 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms