RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 OR4N2Q8NGD1 307 aa23.27■■□□□ 1.32
C9orf40-201ENST00000376854 CNN2Q99439 309 aaKnown RBP23.27■■□□□ 1.32
C9orf40-201ENST00000376854 FBRSQ9HAH7 460 aa23.27■■□□□ 1.32
C9orf40-201ENST00000376854 STMN3Q9NZ72 180 aa23.27■■□□□ 1.32
C9orf40-201ENST00000376854 ABRACLQ9P1F3 81 aa23.27■■□□□ 1.32
C9orf40-201ENST00000376854 GNB5O14775 395 aa23.27■■□□□ 1.32
C9orf40-201ENST00000376854 OR2T7P0C7T2 308 aa23.27■■□□□ 1.32
C9orf40-201ENST00000376854 NAA10P41227 235 aaPredicted RBP23.27■■□□□ 1.32
C9orf40-201ENST00000376854 MMP15P51511 669 aa23.27■■□□□ 1.32
C9orf40-201ENST00000376854 VSX2P58304 361 aaPredicted RBP23.27■■□□□ 1.32
C9orf40-201ENST00000376854 CLPPQ16740 277 aaPredicted RBP23.27■■□□□ 1.32
C9orf40-201ENST00000376854 ALG11Q2TAA5 492 aa23.27■■□□□ 1.32
C9orf40-201ENST00000376854 OR2T27Q8NH04 317 aa23.27■■□□□ 1.32
C9orf40-201ENST00000376854 LMAN2LQ9H0V9 348 aa23.27■■□□□ 1.32
C9orf40-201ENST00000376854 ARL6IP5O75915 188 aa23.26■■□□□ 1.31
C9orf40-201ENST00000376854 IGKV1D-16P01601 117 aa23.26■■□□□ 1.31
C9orf40-201ENST00000376854 SLC35E2P0CK97 266 aa23.26■■□□□ 1.31
C9orf40-201ENST00000376854 CEP78Q5JTW2 689 aa23.26■■□□□ 1.31
C9orf40-201ENST00000376854 MANEAQ5SRI9 462 aa23.26■■□□□ 1.31
C9orf40-201ENST00000376854 SYS1Q8N2H4 156 aa23.26■■□□□ 1.31
C9orf40-201ENST00000376854 LSMEM1Q8N8F7 131 aa23.26■■□□□ 1.31
C9orf40-201ENST00000376854 OR11H7Q8NGC8 314 aa23.26■■□□□ 1.31
C9orf40-201ENST00000376854 HOXB13Q92826 284 aaPredicted RBP23.26■■□□□ 1.31
C9orf40-201ENST00000376854 TEKT2Q9UIF3 430 aa23.26■■□□□ 1.31
C9orf40-201ENST00000376854 ZNF222Q9UK12 451 aa23.26■■□□□ 1.31
C9orf40-201ENST00000376854 SCML1Q9UN30 329 aa23.26■■□□□ 1.31
C9orf40-201ENST00000376854 ING4Q9UNL4 249 aa23.26■■□□□ 1.31
C9orf40-201ENST00000376854 ENTPD2Q9Y5L3 495 aa23.26■■□□□ 1.31
C9orf40-201ENST00000376854 IER3IP1Q9Y5U9 82 aa23.26■■□□□ 1.31
C9orf40-201ENST00000376854 TNFRSF10CO14798 259 aa23.26■■□□□ 1.31
C9orf40-201ENST00000376854 NDUFB2O95178 105 aa23.26■■□□□ 1.31
C9orf40-201ENST00000376854 GIFP27352 417 aa23.26■■□□□ 1.31
C9orf40-201ENST00000376854 SIRPAP78324 504 aa23.26■■□□□ 1.31
C9orf40-201ENST00000376854 DLX2Q07687 328 aaPredicted RBP23.26■■□□□ 1.31
C9orf40-201ENST00000376854 POMGNT2Q8NAT1 580 aa23.26■■□□□ 1.31
C9orf40-201ENST00000376854 SNX33Q8WV41 574 aa23.26■■□□□ 1.31
C9orf40-201ENST00000376854 HRASLS2Q9NWW9 162 aa23.26■■□□□ 1.31
C9orf40-201ENST00000376854 TEX13CA0A0J9YWL9 993 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 RDH16O75452 317 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 HNRNPA2B1P22626 353 aaKnown RBP23.25■■□□□ 1.31
C9orf40-201ENST00000376854 RAB38P57729 211 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 ANGPT1Q15389 498 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 ZNHIT3Q15649 155 aaPredicted RBP23.25■■□□□ 1.31
C9orf40-201ENST00000376854 LINC00114Q6XXX2 140 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 ESPNLQ6ZVH7 1005 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 SLC35F2Q8IXU6 374 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 HAVCR2Q8TDQ0 301 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 CCDC3Q9BQI4 270 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 GSDMCQ9BYG8 508 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 CCDC86Q9H6F5 360 aaKnown RBP23.25■■□□□ 1.31
C9orf40-201ENST00000376854 SLC23A1Q9UHI7 598 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 ICAM5Q9UMF0 924 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 A0A0J9YY10 115 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 MCIDASD6RGH6 385 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 UCHL1P09936 223 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 ULK3Q6PHR2 472 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 BMPERQ8N8U9 685 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 LRFN5Q96NI6 719 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 OR14A2Q96R54 314 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 CITED4Q96RK1 184 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 LMF2Q9BU23 707 aaKnown RBP23.25■■□□□ 1.31
C9orf40-201ENST00000376854 CACNG6Q9BXT2 260 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 OR51J1Q9H342 316 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 ZCCHC4Q9H5U6 513 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 RPS6KB2Q9UBS0 482 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 GNG8Q9UK08 70 aa23.25■■□□□ 1.31
C9orf40-201ENST00000376854 LRRN3E7EW58 273 aa23.24■■□□□ 1.31
C9orf40-201ENST00000376854 RPS11P62280 158 aaKnown RBP eCLIP23.24■■□□□ 1.31
C9orf40-201ENST00000376854 ILF3Q12906 894 aaKnown RBP eCLIP23.24■■□□□ 1.31
C9orf40-201ENST00000376854 CDONQ4KMG0 1287 aa23.24■■□□□ 1.31
C9orf40-201ENST00000376854 KIRREL2Q6UWL6 708 aa23.24■■□□□ 1.31
C9orf40-201ENST00000376854 TMEM184AQ6ZMB5 413 aa23.24■■□□□ 1.31
C9orf40-201ENST00000376854 LRRN3Q9H3W5 708 aa23.24■■□□□ 1.31
C9orf40-201ENST00000376854 EMC7Q9NPA0 242 aa23.24■■□□□ 1.31
C9orf40-201ENST00000376854 CPNE7Q9UBL6 633 aa23.24■■□□□ 1.31
C9orf40-201ENST00000376854 AK6Q9Y3D8 172 aaKnown RBP23.24■■□□□ 1.31
C9orf40-201ENST00000376854 TRBV2A0A0J9YWF9 115 aa23.24■■□□□ 1.31
C9orf40-201ENST00000376854 TNFRSF10AO00220 468 aa23.24■■□□□ 1.31
C9orf40-201ENST00000376854 TSC22D2O75157 780 aa23.24■■□□□ 1.31
C9orf40-201ENST00000376854 FAM53BQ14153 422 aa23.24■■□□□ 1.31
C9orf40-201ENST00000376854 GGTLC2Q14390 218 aa23.24■■□□□ 1.31
C9orf40-201ENST00000376854 OR2M2Q96R28 347 aa23.24■■□□□ 1.31
C9orf40-201ENST00000376854 RBCK1Q9BYM8 510 aa23.24■■□□□ 1.31
C9orf40-201ENST00000376854 MKKSQ9NPJ1 570 aaPredicted RBP23.24■■□□□ 1.31
C9orf40-201ENST00000376854 ST6GALNAC1Q9NSC7 600 aaPredicted RBP23.24■■□□□ 1.31
C9orf40-201ENST00000376854 MRPL39Q9NYK5 338 aaKnown RBP23.24■■□□□ 1.31
C9orf40-201ENST00000376854 CAMK2AQ9UQM7 478 aa23.24■■□□□ 1.31
C9orf40-201ENST00000376854 ADAM18Q9Y3Q7 739 aa23.24■■□□□ 1.31
C9orf40-201ENST00000376854 GATBO75879 557 aaKnown RBP23.23■■□□□ 1.31
C9orf40-201ENST00000376854 S1PR1P21453 382 aa23.23■■□□□ 1.31
C9orf40-201ENST00000376854 EDNRAP25101 427 aa23.23■■□□□ 1.31
C9orf40-201ENST00000376854 CTHP32929 405 aa23.23■■□□□ 1.31
C9orf40-201ENST00000376854 PON3Q15166 354 aa23.23■■□□□ 1.31
C9orf40-201ENST00000376854 RPL22L1Q6P5R6 122 aaKnown RBP23.23■■□□□ 1.31
C9orf40-201ENST00000376854 KIAA1324Q6UXG2 1013 aaKnown RBP23.23■■□□□ 1.31
C9orf40-201ENST00000376854 SFTPA2Q8IWL1 248 aa23.23■■□□□ 1.31
C9orf40-201ENST00000376854 SGTBQ96EQ0 304 aa23.23■■□□□ 1.31
C9orf40-201ENST00000376854 SLCO1C1Q9NYB5 712 aa23.23■■□□□ 1.31
C9orf40-201ENST00000376854 CLEC1BQ9P126 229 aa23.23■■□□□ 1.31
C9orf40-201ENST00000376854 COPZ2Q9P299 210 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms