RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 PIN1P1O15428 100 aa15.23■□□□□ 0.03
TRIM39-201ENST00000376656 ZNF749O43361 778 aa15.23■□□□□ 0.03
TRIM39-201ENST00000376656 RPN2P04844 631 aa15.23■□□□□ 0.03
TRIM39-201ENST00000376656 PSMB10P40306 273 aa15.23■□□□□ 0.03
TRIM39-201ENST00000376656 ACTC1P68032 377 aa15.23■□□□□ 0.03
TRIM39-201ENST00000376656 ACTA1P68133 377 aa15.23■□□□□ 0.03
TRIM39-201ENST00000376656 ETFDHQ16134 617 aa15.23■□□□□ 0.03
TRIM39-201ENST00000376656 RANBP3LQ86VV4 465 aaPredicted RBP15.23■□□□□ 0.03
TRIM39-201ENST00000376656 OR5M1Q8NGP8 315 aa15.23■□□□□ 0.03
TRIM39-201ENST00000376656 DOK4Q8TEW6 326 aa15.23■□□□□ 0.03
TRIM39-201ENST00000376656 LGR4Q9BXB1 951 aa15.23■□□□□ 0.03
TRIM39-201ENST00000376656 NPIPA5A0A0B4J1W7 369 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 ANKRD20A5PA0PJZ0 165 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 NPIPA7E9PJI5 369 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 AIPO00170 330 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 ITGA10O75578 1167 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 NPIPA8P0DM63 369 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 DPP4P27487 766 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 NAA10P41227 235 aaPredicted RBP15.22■□□□□ 0.03
TRIM39-201ENST00000376656 SIRPAP78324 504 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 DPTQ07507 201 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 METRNLQ641Q3 311 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 C17orf107Q6ZR85 190 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 HDDC3Q8N4P3 179 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 FERD3LQ96RJ6 166 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 WSB2Q9NYS7 404 aaPredicted RBP15.22■□□□□ 0.03
TRIM39-201ENST00000376656 USP36Q9P275 1121 aaKnown RBP15.22■□□□□ 0.03
TRIM39-201ENST00000376656 ZNF780BQ9Y6R6 833 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 TP53BP1Q12888 1972 aaPredicted RBP15.22■□□□□ 0.03
TRIM39-201ENST00000376656 FXYD6-FXYD2A0A087WZ82 144 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 ACOD1A6NK06 481 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 ZNF3P17036 446 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 SRMP19623 302 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 EDNRAP25101 427 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 DUSP5Q16690 384 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 B3GNTL1Q67FW5 361 aaPredicted RBP15.22■□□□□ 0.03
TRIM39-201ENST00000376656 OLFML2AQ68BL7 652 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 ZNF454Q8N9F8 522 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 GINS4Q9BRT9 223 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 FXYD6Q9H0Q3 95 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 CACYBPQ9HB71 228 aaKnown RBP15.22■□□□□ 0.03
TRIM39-201ENST00000376656 EXOSC3Q9NQT5 275 aaKnown RBP15.22■□□□□ 0.03
TRIM39-201ENST00000376656 NAT2P11245 290 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 PPP3CBP16298 524 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 CALCRP30988 508 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 P2RX1P51575 399 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 UBE2MP61081 183 aaKnown RBP15.22■□□□□ 0.03
TRIM39-201ENST00000376656 CTAG1AP78358 180 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 TEAD2Q15562 447 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 CSRP2Q16527 193 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 CXorf40AQ8TE69 158 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 GPN1Q9HCN4 374 aaPredicted RBP15.22■□□□□ 0.03
TRIM39-201ENST00000376656 MEPEQ9NQ76 525 aaPredicted RBP15.22■□□□□ 0.03
TRIM39-201ENST00000376656 HAO2Q9NYQ3 351 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 TAS2R10Q9NYW0 307 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 GNG8Q9UK08 70 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 HCFC2Q9Y5Z7 792 aa15.22■□□□□ 0.03
TRIM39-201ENST00000376656 IFITM5A6NNB3 132 aa15.21■□□□□ 0.03
TRIM39-201ENST00000376656 APOC3P02656 99 aa15.21■□□□□ 0.03
TRIM39-201ENST00000376656 VSIG10L2P0DP72 767 aa15.21■□□□□ 0.03
TRIM39-201ENST00000376656 H2BFSP57053 126 aa15.21■□□□□ 0.03
TRIM39-201ENST00000376656 GK2Q14410 553 aaPredicted RBP15.21■□□□□ 0.03
TRIM39-201ENST00000376656 GRM7Q14831 915 aa15.21■□□□□ 0.03
TRIM39-201ENST00000376656 HSD17B13Q7Z5P4 300 aaPredicted RBP15.21■□□□□ 0.03
TRIM39-201ENST00000376656 RNF113BQ8IZP6 322 aaKnown RBP15.21■□□□□ 0.03
TRIM39-201ENST00000376656 OR2L5Q8NG80 312 aa15.21■□□□□ 0.03
TRIM39-201ENST00000376656 MFRPQ9BY79 579 aa15.21■□□□□ 0.03
TRIM39-201ENST00000376656 SEMA4CQ9C0C4 833 aa15.21■□□□□ 0.03
TRIM39-201ENST00000376656 KLF15Q9UIH9 416 aa15.21■□□□□ 0.03
TRIM39-201ENST00000376656 FOXJ3Q9UPW0 622 aa15.21■□□□□ 0.03
TRIM39-201ENST00000376656 FMO6PO60774 539 aa15.21■□□□□ 0.03
TRIM39-201ENST00000376656 SLC35G4P0C7Q5 338 aa15.21■□□□□ 0.03
TRIM39-201ENST00000376656 PPP2CBP62714 309 aa15.21■□□□□ 0.03
TRIM39-201ENST00000376656 PPP2CAP67775 309 aa15.21■□□□□ 0.03
TRIM39-201ENST00000376656 MESP2Q0VG99 397 aa15.21■□□□□ 0.03
TRIM39-201ENST00000376656 MRPL2Q5T653 305 aaKnown RBP15.21■□□□□ 0.03
TRIM39-201ENST00000376656 LHX8Q68G74 356 aa15.21■□□□□ 0.03
TRIM39-201ENST00000376656 GSG1LQ6UXU4 331 aa15.21■□□□□ 0.03
TRIM39-201ENST00000376656 TMPRSS11FQ6ZWK6 438 aa15.21■□□□□ 0.03
TRIM39-201ENST00000376656 LINC00518Q8N0U6 118 aa15.21■□□□□ 0.03
TRIM39-201ENST00000376656 ST8SIA2Q92186 375 aa15.21■□□□□ 0.03
TRIM39-201ENST00000376656 CMTM3Q96MX0 182 aa15.21■□□□□ 0.03
TRIM39-201ENST00000376656 SLC6A20Q9NP91 592 aa15.21■□□□□ 0.03
TRIM39-201ENST00000376656 APOBEC3BQ9UH17 382 aaKnown RBP15.21■□□□□ 0.03
TRIM39-201ENST00000376656 OPN4Q9UHM6 478 aa15.21■□□□□ 0.03
TRIM39-201ENST00000376656 DUXAA6NLW8 204 aa15.2■□□□□ 0.02
TRIM39-201ENST00000376656 PYCARD-AS1I3L0S3 204 aa15.2■□□□□ 0.02
TRIM39-201ENST00000376656 LATO43561 262 aa15.2■□□□□ 0.02
TRIM39-201ENST00000376656 KDM4BO94953 1096 aa15.2■□□□□ 0.02
TRIM39-201ENST00000376656 NDUFB6O95139 128 aa15.2■□□□□ 0.02
TRIM39-201ENST00000376656 PLATP00750 562 aa15.2■□□□□ 0.02
TRIM39-201ENST00000376656 ADRB3P13945 408 aa15.2■□□□□ 0.02
TRIM39-201ENST00000376656 MLF2Q15773 248 aaPredicted RBP15.2■□□□□ 0.02
TRIM39-201ENST00000376656 TMEM69Q5SWH9 247 aa15.2■□□□□ 0.02
TRIM39-201ENST00000376656 CDK20Q8IZL9 346 aa15.2■□□□□ 0.02
TRIM39-201ENST00000376656 TTLQ8NG68 377 aa15.2■□□□□ 0.02
TRIM39-201ENST00000376656 C1orf216Q8TAB5 229 aa15.2■□□□□ 0.02
TRIM39-201ENST00000376656 SYNPRQ8TBG9 265 aa15.2■□□□□ 0.02
TRIM39-201ENST00000376656 MRPS24Q96EL2 167 aaKnown RBP15.2■□□□□ 0.02
TRIM39-201ENST00000376656 TNFRSF13CQ96RJ3 184 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms