RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 SLC1A3P43003 542 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 POLR2HP52434 150 aaKnown RBP12.56□□□□□ -0.4
NELFE-201ENST00000375425 SLC18A1P54219 525 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 H3F3AP84243 136 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 MAPK11Q15759 364 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 SLC9B1Q4ZJI4 515 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 PDCD4Q53EL6 469 aaKnown RBP12.56□□□□□ -0.4
NELFE-201ENST00000375425 MRPL2Q5T653 305 aaKnown RBP12.56□□□□□ -0.4
NELFE-201ENST00000375425 P2RY8Q86VZ1 359 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 KBTBD8Q8NFY9 601 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 PIGXQ8TBF5 258 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 WDR60Q8WVS4 1066 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 PMM1Q92871 262 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 DDIT4LQ96D03 193 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 TRIM2Q9C040 744 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 RLIMQ9NVW2 624 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 NKIRAS1Q9NYS0 192 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 TMED7Q9Y3B3 224 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 DNHD1Q96M86 4753 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 CSPG4Q6UVK1 2322 aa12.56□□□□□ -0.4
NELFE-201ENST00000375425 CIB4A0PJX0 185 aa12.55□□□□□ -0.4
NELFE-201ENST00000375425 ZNF208O43345 1280 aa12.55□□□□□ -0.4
NELFE-201ENST00000375425 MRPL33O75394 65 aaKnown RBP12.55□□□□□ -0.4
NELFE-201ENST00000375425 RAD51DO75771 328 aa12.55□□□□□ -0.4
NELFE-201ENST00000375425 IMPDH2P12268 514 aa12.55□□□□□ -0.4
NELFE-201ENST00000375425 MAGEA8P43361 318 aa12.55□□□□□ -0.4
NELFE-201ENST00000375425 MVDP53602 400 aa12.55□□□□□ -0.4
NELFE-201ENST00000375425 SLC16A1P53985 500 aa12.55□□□□□ -0.4
NELFE-201ENST00000375425 SLC35A1P78382 337 aa12.55□□□□□ -0.4
NELFE-201ENST00000375425 EPS8Q12929 822 aa12.55□□□□□ -0.4
NELFE-201ENST00000375425 GSTA3Q16772 222 aa12.55□□□□□ -0.4
NELFE-201ENST00000375425 PGGHGQ32M88 737 aa12.55□□□□□ -0.4
NELFE-201ENST00000375425 PEX5LQ8IYB4 626 aa12.55□□□□□ -0.4
NELFE-201ENST00000375425 APH1AQ96BI3 265 aa12.55□□□□□ -0.4
NELFE-201ENST00000375425 TRMT61AQ96FX7 289 aaKnown RBP12.55□□□□□ -0.4
NELFE-201ENST00000375425 ADAM19Q9H013 955 aa12.55□□□□□ -0.4
NELFE-201ENST00000375425 ASB6Q9NWX5 421 aa12.55□□□□□ -0.4
NELFE-201ENST00000375425 CISD1Q9NZ45 108 aaKnown RBP12.55□□□□□ -0.4
NELFE-201ENST00000375425 NPAP1Q9NZP6 1156 aa12.55□□□□□ -0.4
NELFE-201ENST00000375425 MAGED1Q9Y5V3 778 aaPredicted RBP12.55□□□□□ -0.4
NELFE-201ENST00000375425 FN1P02751 2386 aaKnown RBP12.55□□□□□ -0.4
NELFE-201ENST00000375425 CADP27708 2225 aa12.55□□□□□ -0.4
NELFE-201ENST00000375425 A0A1W2PP18 115 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 ZC3H12DA2A288 527 aaKnown RBP12.54□□□□□ -0.4
NELFE-201ENST00000375425 OR5H1A6NKK0 313 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 CCT8L1PA6NM43 557 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 FAAHO00519 579 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 EIF1BO60739 113 aaKnown RBP12.54□□□□□ -0.4
NELFE-201ENST00000375425 ANP32DO95626 131 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 GKN3PP0CG01 181 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 ETFAP13804 333 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 CDKN1AP38936 164 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 CRATP43155 626 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 MAP2K6P52564 334 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 FAPQ12884 760 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 TNK1Q13470 666 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 DNAJC14Q6Y2X3 702 aaPredicted RBP12.54□□□□□ -0.4
NELFE-201ENST00000375425 SSX8Q7RTT4 187 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 MAVSQ7Z434 540 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 VRK2Q86Y07 508 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 GTPBP3Q969Y2 492 aaKnown RBP12.54□□□□□ -0.4
NELFE-201ENST00000375425 NAA11Q9BSU3 229 aaPredicted RBP12.54□□□□□ -0.4
NELFE-201ENST00000375425 TPT1P8Q9HAU6 139 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 SDR39U1Q9NRG7 319 aaPredicted RBP12.54□□□□□ -0.4
NELFE-201ENST00000375425 ZIM2Q9NZV7 527 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 P2RX2Q9UBL9 471 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 CDHR4A6H8M9 788 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 SHISA9B4DS77 424 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 ABCD4O14678 606 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 UBDO15205 165 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 CD8AP01732 235 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 TFPTP0C1Z6 253 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 ZCCHC18P0CG32 403 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 UQCRBP14927 111 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 ACAA2P42765 397 aaKnown RBP12.54□□□□□ -0.4
NELFE-201ENST00000375425 CLEC12BQ2HXU8 276 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 OR9I1Q8NGQ6 314 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 OR52N5Q8NH56 324 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 OR52P1PQ8NH57 321 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 SLC38A5Q8WUX1 472 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 TLCD1Q96CP7 247 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 ITCHQ96J02 903 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 MUS81Q96NY9 551 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 OR52B2Q96RD2 323 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 RMND5AQ9H871 391 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 TMBIM4Q9HC24 238 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 PARPBPQ9NWS1 579 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 TAS2R16Q9NYV7 291 aa12.54□□□□□ -0.4
NELFE-201ENST00000375425 TLN2Q9Y4G6 2542 aa12.53□□□□□ -0.4
NELFE-201ENST00000375425 ABCA2Q9BZC7 2435 aa12.53□□□□□ -0.4
NELFE-201ENST00000375425 A0A1W2PR80 420 aa12.53□□□□□ -0.4
NELFE-201ENST00000375425 CXCR1P25024 350 aa12.53□□□□□ -0.4
NELFE-201ENST00000375425 PCSK6P29122 969 aa12.53□□□□□ -0.4
NELFE-201ENST00000375425 IDUAP35475 653 aa12.53□□□□□ -0.4
NELFE-201ENST00000375425 POLR2JP52435 117 aaKnown RBP12.53□□□□□ -0.4
NELFE-201ENST00000375425 CRISP3P54108 245 aa12.53□□□□□ -0.4
NELFE-201ENST00000375425 FOXG1P55316 489 aaPredicted RBP12.53□□□□□ -0.4
NELFE-201ENST00000375425 SLC17A1Q14916 467 aa12.53□□□□□ -0.4
NELFE-201ENST00000375425 GTDC1Q4AE62 458 aa12.53□□□□□ -0.4
NELFE-201ENST00000375425 LIN52Q52LA3 116 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms