RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 HCAR2Q8TDS4 363 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 SERINC1Q9NRX5 453 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 PPP4R1LQ9P1A2 415 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 CBLCQ9ULV8 474 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 LSM5Q9Y4Y9 91 aaKnown RBP6.08□□□□□ -1.44
SMC1A-202ENST00000375340 A0A0J9YY10 115 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 B4DXG7 233 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 H7C2Y5 167 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 M0QYG6 137 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 ACOT7O00154 380 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 TMPRSS11DO60235 418 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 ZNF14P17017 642 aaPredicted RBP6.08□□□□□ -1.44
SMC1A-202ENST00000375340 CTGFP29279 349 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 ARHGAP19Q14CB8 494 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 ASTLQ6HA08 431 aaPredicted RBP6.08□□□□□ -1.44
SMC1A-202ENST00000375340 GSG1LQ6UXU4 331 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 Q6ZNB5 142 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 ORAI1Q96D31 301 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 RNF32Q9H0A6 362 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 DUSP21Q9H596 190 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 ACSS1Q9NUB1 689 aaPredicted RBP6.08□□□□□ -1.44
SMC1A-202ENST00000375340 GLTPQ9NZD2 209 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 FBXO9Q9UK97 447 aaPredicted RBP6.08□□□□□ -1.44
SMC1A-202ENST00000375340 ZNF281Q9Y2X9 895 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 URB1O60287 2271 aaKnown RBP6.08□□□□□ -1.44
SMC1A-202ENST00000375340 TRDV1A0A1B0GX56 115 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 LRIT2A6NDA9 550 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 TCRBP04435 133 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 FOSL2P15408 326 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 RAD52P43351 418 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 DHRS1Q96LJ7 313 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 SMIM3Q9BZL3 60 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 PRSS16Q9NQE7 514 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 SDHAF3Q9NRP4 125 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 TLX3O43711 291 aaPredicted RBP6.08□□□□□ -1.44
SMC1A-202ENST00000375340 SRPX2O60687 465 aaPredicted RBP6.08□□□□□ -1.44
SMC1A-202ENST00000375340 KNG1P01042 644 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 WNT3P56703 355 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 CSNK1G2P78368 415 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 PXKQ7Z7A4 578 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 OR51T1Q8NGJ9 327 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 SLC7A13Q8TCU3 470 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 KCNN3Q9UGI6 736 aa6.08□□□□□ -1.44
SMC1A-202ENST00000375340 SLC5A10A0PJK1 596 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 CSTBP04080 98 aaKnown RBP6.07□□□□□ -1.44
SMC1A-202ENST00000375340 PRKACAP17612 351 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 RORAP35398 523 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 EPHA5P54756 1037 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 PRPS1P60891 318 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 GPR50Q13585 617 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 CD300LGQ6UXG3 332 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 TRAPPC6BQ86SZ2 158 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 GCDHQ92947 438 aaPredicted RBP6.07□□□□□ -1.44
SMC1A-202ENST00000375340 KLHDC7BQ96G42 594 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 INTS14Q96SY0 518 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 PHB2Q99623 299 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 NUDT22Q9BRQ3 303 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 SLC5A7Q9GZV3 580 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 RGCCQ9H4X1 137 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 INPP5EQ9NRR6 644 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.07□□□□□ -1.44
SMC1A-202ENST00000375340 YY2O15391 372 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 PRKNO60260 465 aaPredicted RBP6.07□□□□□ -1.44
SMC1A-202ENST00000375340 EMDP50402 254 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 ZP2Q05996 745 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 TNK1Q13470 666 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 IHHQ14623 411 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 OR7A5Q15622 319 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 EID2BQ96D98 161 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 HCAR1Q9BXC0 346 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 NKX2-4Q9H2Z4 354 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 AUNIPQ9H7T9 357 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 CHD5Q8TDI0 1954 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 TRBV5-4A0A0C4DH59 114 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 H0YGG7 62 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 SURF4O15260 269 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 PEX14O75381 377 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 AK1P00568 194 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 PNMTP11086 282 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 TUBG1P23258 451 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 ARF3P61204 181 aaPredicted RBP6.07□□□□□ -1.44
SMC1A-202ENST00000375340 FGL1Q08830 312 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 DUSP19Q8WTR2 217 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 ST8SIA2Q92186 375 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 KLHL15Q96M94 604 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 SCGB3A2Q96PL1 93 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 PDCD1LG2Q9BQ51 273 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 KATNB1Q9BVA0 655 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 TMEM168Q9H0V1 697 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 ZBP1Q9H171 429 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 PPA2Q9H2U2 334 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 APOBEC3BQ9UH17 382 aaKnown RBP6.07□□□□□ -1.44
SMC1A-202ENST00000375340 TMPRSS11EQ9UL52 423 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 CA14Q9ULX7 337 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 MED16Q9Y2X0 877 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 KCNE3Q9Y6H6 103 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 OTOFQ9HC10 1997 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 F8W036 122 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 UPK1AO00322 258 aa6.07□□□□□ -1.44
SMC1A-202ENST00000375340 ZDHHC11BP0C7U3 371 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms