RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 IDSP22304 550 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 RNF144AP50876 292 aaPredicted RBP11.25□□□□□ -0.61
C9orf3-203ENST00000375315 EFNB1P98172 346 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 MELKQ14680 651 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 TMEM255AQ5JRV8 349 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 SMARCD3Q6STE5 483 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 TMEM92Q6UXU6 159 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 NHLRC1Q6VVB1 395 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 FGF11Q92914 225 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 LRIG1Q96JA1 1093 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 MS4A4EQ96PG1 132 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 GAL3ST1Q99999 423 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 QRSL1Q9H0R6 528 aaKnown RBP11.25□□□□□ -0.61
C9orf3-203ENST00000375315 NOX3Q9HBY0 568 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 HRASLSQ9HDD0 168 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 UFSP2Q9NUQ7 469 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 ENTPD4Q9Y227 616 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 RCE1Q9Y256 329 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 KCNK6Q9Y257 313 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 IL5P05113 134 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 GP1BAP07359 652 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 POU2F2P09086 479 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 ANXA4P09525 319 aaPredicted RBP11.25□□□□□ -0.61
C9orf3-203ENST00000375315 ACP5P13686 325 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 AOAHP28039 575 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 CCR8P51685 355 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 OR10A3P58181 314 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 HBA1P69905 142 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 DCDP81605 110 aaKnown RBP11.25□□□□□ -0.61
C9orf3-203ENST00000375315 ECH1Q13011 328 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 PDZK1IP1Q13113 114 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 NAE1Q13564 534 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 GUCA2BQ16661 112 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 ZNF542PQ5EBM4 170 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 LYPLAL1Q5VWZ2 237 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 BEND4Q6ZU67 534 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 MOB3CQ70IA8 216 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 POGLUT1Q8NBL1 392 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 PHOSPHO1Q8TCT1 267 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 THAP4Q8WY91 577 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 BARX1Q9HBU1 254 aaPredicted RBP11.25□□□□□ -0.61
C9orf3-203ENST00000375315 KLHL1Q9NR64 748 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 GPR52Q9Y2T5 361 aa11.25□□□□□ -0.61
C9orf3-203ENST00000375315 TCRBV21S2A2A0A5A6 115 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 OR6C74A6NCV1 312 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 CTDSPLO15194 276 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 UBE2IP63279 158 aaKnown RBP11.24□□□□□ -0.61
C9orf3-203ENST00000375315 E2F1Q01094 437 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 TMEM44Q2T9K0 475 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 AGBL4Q5VU57 503 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 TCTN3Q6NUS6 607 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 CD300LDQ6UXZ3 194 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 FAM160A2Q8N612 972 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-203ENST00000375315 WDSUB1Q8N9V3 476 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 OR4F15Q8NGB8 312 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 HAVCR2Q8TDQ0 301 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 RAD51AP1Q96B01 352 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 MRPL15Q9P015 296 aaKnown RBP11.24□□□□□ -0.61
C9orf3-203ENST00000375315 SLC23A2Q9UGH3 650 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 F5H5P2 479 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 UBE2CO00762 179 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 KHDRBS3O75525 346 aaKnown RBP11.24□□□□□ -0.61
C9orf3-203ENST00000375315 IL9P15248 144 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 RPA2P15927 270 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 CBR1P16152 277 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 MGMTP16455 207 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 MPGP29372 298 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 PPP2CBP62714 309 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 PPP2CAP67775 309 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 MEF2AQ02078 507 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-203ENST00000375315 BDH1Q02338 343 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 UAP1L1Q3KQV9 507 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 REEP3Q6NUK4 255 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 MTFR2Q6P444 385 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 ZNF322Q6U7Q0 402 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-203ENST00000375315 CXXC5Q7LFL8 322 aaKnown RBP11.24□□□□□ -0.61
C9orf3-203ENST00000375315 HORMAD2Q8N7B1 307 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 GOT1L1Q8NHS2 421 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-203ENST00000375315 BHLHE41Q9C0J9 482 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-203ENST00000375315 UCK1Q9HA47 277 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 SEBOXQ9HB31 216 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-203ENST00000375315 CACYBPQ9HB71 228 aaKnown RBP11.24□□□□□ -0.61
C9orf3-203ENST00000375315 FBXL3Q9UKT7 428 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 RPH3AQ9Y2J0 694 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-203ENST00000375315 FRYLO94915 3013 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 TRAPPC13A5PLN9 417 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 KDM4EB2RXH2 506 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-203ENST00000375315 C6orf47O95873 294 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 FPR3P25089 353 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 RPL3P39023 403 aaKnown RBP11.24□□□□□ -0.61
C9orf3-203ENST00000375315 CHIT1Q13231 466 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 ZXDCQ2QGD7 858 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-203ENST00000375315 ZNF776Q68DI1 518 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-203ENST00000375315 OR4K1Q8NGD4 311 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 SLC7A13Q8TCU3 470 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 SMAP2Q8WU79 429 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-203ENST00000375315 THEM6Q8WUY1 208 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 WDR89Q96FK6 387 aaPredicted RBP11.24□□□□□ -0.61
C9orf3-203ENST00000375315 TMEM41AQ96HV5 264 aa11.24□□□□□ -0.61
C9orf3-203ENST00000375315 CTPS2Q9NRF8 586 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms