RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 ING1Q9UK53 422 aaPredicted RBP19.5■□□□□ 0.71
UPF3A-202ENST00000375299 FBXL3Q9UKT7 428 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 CA5BQ9Y2D0 317 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 NOTCH4Q99466 2003 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 PTPRSQ13332 1948 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 ATP6V1G2-DDX39BF2Z307 99 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 PTP4A3O75365 173 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 KHDRBS3O75525 346 aaKnown RBP19.5■□□□□ 0.71
UPF3A-202ENST00000375299 DBIP07108 87 aaKnown RBP19.5■□□□□ 0.71
UPF3A-202ENST00000375299 RPS4Y1P22090 263 aaKnown RBP19.5■□□□□ 0.71
UPF3A-202ENST00000375299 RAP2BP61225 183 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 BTN3A2P78410 334 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 SIM1P81133 766 aaPredicted RBP19.5■□□□□ 0.71
UPF3A-202ENST00000375299 HTR4Q13639 388 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 HES5Q5TA89 166 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 OVCH2Q7RTZ1 564 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 ARL14Q8N4G2 192 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 MEIOBQ8N635 442 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 EID2Q8N6I1 236 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 OR6M1Q8NGM8 313 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 ST8SIA4Q92187 359 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 ZNF350Q9GZX5 532 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 SHARPINQ9H0F6 387 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 ZNF69Q9UC07 566 aa19.5■□□□□ 0.71
UPF3A-202ENST00000375299 SYNDIG1LA6NDD5 238 aa19.49■□□□□ 0.71
UPF3A-202ENST00000375299 LAMP2P13473 410 aa19.49■□□□□ 0.71
UPF3A-202ENST00000375299 NFYAP23511 347 aaPredicted RBP19.49■□□□□ 0.71
UPF3A-202ENST00000375299 PSMA6P60900 246 aaKnown RBP19.49■□□□□ 0.71
UPF3A-202ENST00000375299 SIRPAP78324 504 aa19.49■□□□□ 0.71
UPF3A-202ENST00000375299 TUSC1Q2TAM9 212 aa19.49■□□□□ 0.71
UPF3A-202ENST00000375299 PLPP4Q5VZY2 271 aa19.49■□□□□ 0.71
UPF3A-202ENST00000375299 OLFML2AQ68BL7 652 aa19.49■□□□□ 0.71
UPF3A-202ENST00000375299 OR2L13Q8N349 312 aa19.49■□□□□ 0.71
UPF3A-202ENST00000375299 MFSD9Q8NBP5 474 aa19.49■□□□□ 0.71
UPF3A-202ENST00000375299 OR2L3Q8NG85 312 aa19.49■□□□□ 0.71
UPF3A-202ENST00000375299 SLC25A38Q96DW6 304 aa19.49■□□□□ 0.71
UPF3A-202ENST00000375299 MEPEQ9NQ76 525 aaPredicted RBP19.49■□□□□ 0.71
UPF3A-202ENST00000375299 SLC27A6Q9Y2P4 619 aa19.49■□□□□ 0.71
UPF3A-202ENST00000375299 MUC22E2RYF6 1773 aaPredicted RBP19.49■□□□□ 0.71
UPF3A-202ENST00000375299 OR2M5A3KFT3 312 aa19.49■□□□□ 0.71
UPF3A-202ENST00000375299 MCRIP1C9JLW8 97 aa19.49■□□□□ 0.71
UPF3A-202ENST00000375299 PRICKLE3O43900 615 aaPredicted RBP19.49■□□□□ 0.71
UPF3A-202ENST00000375299 NMBP08949 121 aa19.49■□□□□ 0.71
UPF3A-202ENST00000375299 P2RY2P41231 377 aa19.49■□□□□ 0.71
UPF3A-202ENST00000375299 CAMK1Q14012 370 aa19.49■□□□□ 0.71
UPF3A-202ENST00000375299 RPL22L1Q6P5R6 122 aaKnown RBP19.49■□□□□ 0.71
UPF3A-202ENST00000375299 MTSS1LQ765P7 747 aa19.49■□□□□ 0.71
UPF3A-202ENST00000375299 ZMYND19Q96E35 227 aaPredicted RBP19.49■□□□□ 0.71
UPF3A-202ENST00000375299 TAS2R5Q9NYW4 299 aa19.49■□□□□ 0.71
UPF3A-202ENST00000375299 TRBV2A0A0J9YWF9 115 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 ZNF879B4DU55 563 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 GALR3O60755 368 aaPredicted RBP19.48■□□□□ 0.71
UPF3A-202ENST00000375299 IFNGP01579 166 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 CD1AP06126 327 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 NID1P14543 1247 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 ZNF626Q68DY1 528 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 ARHGAP11AQ6P4F7 1023 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 UNQ9370/PRO34162Q6UXP9 181 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 MRPL43Q8N983 215 aaKnown RBP19.48■□□□□ 0.71
UPF3A-202ENST00000375299 OR52E1Q8NGJ3 308 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 FCAMRQ8WWV6 532 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 GFI1Q99684 422 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 ANKRD10Q9NXR5 420 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 SCN3AQ9NY46 2000 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 LATO43561 262 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 CREBL2O60519 120 aaPredicted RBP19.48■□□□□ 0.71
UPF3A-202ENST00000375299 FMO6PO60774 539 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 OR2T7P0C7T2 308 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 EDNRAP25101 427 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 KRT33BQ14525 404 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 LINC00303Q3SY05 128 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 OR5M10Q6IEU7 315 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 OR2T27Q8NH04 317 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 LRRC3BQ96PB8 259 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 PDCD1LG2Q9BQ51 273 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 GPN1Q9HCN4 374 aaPredicted RBP19.48■□□□□ 0.71
UPF3A-202ENST00000375299 NOX4Q9NPH5 578 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 KLK11Q9UBX7 282 aa19.48■□□□□ 0.71
UPF3A-202ENST00000375299 NPIPA5A0A0B4J1W7 369 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 ANKRD20A5PA0PJZ0 165 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 KRBOX1C9JBD0 128 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 NPIPA7E9PJI5 369 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 B3GALNT1O75752 331 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 OR2A4O95047 310 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 NPIPA8P0DM63 369 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 SRMP19623 302 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 POU3F2P20265 443 aaPredicted RBP19.47■□□□□ 0.71
UPF3A-202ENST00000375299 DPP4P27487 766 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 PEBP1P30086 187 aaKnown RBP19.47■□□□□ 0.71
UPF3A-202ENST00000375299 GAS6Q14393 721 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 NUDT18Q6ZVK8 323 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 THEM6Q8WUY1 208 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 ING5Q8WYH8 240 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 OR2A7Q96R45 310 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 CNN2Q99439 309 aaKnown RBP19.47■□□□□ 0.71
UPF3A-202ENST00000375299 USP36Q9P275 1121 aaKnown RBP19.47■□□□□ 0.71
UPF3A-202ENST00000375299 KCNE5Q9UJ90 142 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 A0A1B0GTQ1 180 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 IGLON5A6NGN9 336 aa19.47■□□□□ 0.71
UPF3A-202ENST00000375299 IFITM5A6NNB3 132 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms