RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 TRIM15Q9C019 465 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 OR11A1Q9GZK7 315 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 SLC7A8Q9UHI5 535 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 A4GNTQ9UNA3 340 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 POMPQ9Y244 141 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 SLC5A6Q9Y289 635 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 ZNF175Q9Y473 711 aa13.48□□□□□ -0.25
HSPG2-201ENST00000374673 NCOA6Q14686 2063 aaPredicted RBP13.48□□□□□ -0.25
HSPG2-201ENST00000374673 ZC3H12DA2A288 527 aaKnown RBP13.47□□□□□ -0.25
HSPG2-201ENST00000374673 MBD3L4A6NDZ8 208 aaPredicted RBP13.47□□□□□ -0.25
HSPG2-201ENST00000374673 MBD3L3A6NE82 208 aaPredicted RBP13.47□□□□□ -0.25
HSPG2-201ENST00000374673 MBD3L5A6NJ08 208 aaPredicted RBP13.47□□□□□ -0.25
HSPG2-201ENST00000374673 AQP12BA6NM10 295 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 KDM4EB2RXH2 506 aaPredicted RBP13.47□□□□□ -0.25
HSPG2-201ENST00000374673 CXCL13O43927 109 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 PMS2P2O95744 297 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 TFPIP10646 304 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 THRBP10828 461 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 TIMP3P35625 211 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 CARD18P57730 90 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 RAC3P60763 192 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 EGR4Q05215 589 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 PIN1Q13526 163 aaPredicted RBP13.47□□□□□ -0.25
HSPG2-201ENST00000374673 SGCBQ16585 318 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 MTFR2Q6P444 385 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 SEM1Q6ZVN7 128 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 GDF7Q7Z4P5 450 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 TSEN54Q7Z6J9 526 aaKnown RBP13.47□□□□□ -0.25
HSPG2-201ENST00000374673 AQP12AQ8IXF9 295 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 MARVELD2Q8N4S9 558 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 MBD3L2Q8NHZ7 208 aaPredicted RBP13.47□□□□□ -0.25
HSPG2-201ENST00000374673 OSTF1Q92882 214 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 WNT2BQ93097 391 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 CPNE4Q96A23 557 aaPredicted RBP13.47□□□□□ -0.25
HSPG2-201ENST00000374673 SLC41A3Q96GZ6 507 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 MPP4Q96JB8 637 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 C7orf34Q96L11 122 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 DOCK7Q96N67 2140 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 PRSS27Q9BQR3 290 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 TIGARQ9NQ88 270 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 SLC7A7Q9UM01 511 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 TRAPPC4Q9Y296 219 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 ENPP4Q9Y6X5 453 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 V9GYQ6 96 aa13.47□□□□□ -0.25
HSPG2-201ENST00000374673 IGKV1D-42A0A075B6H8 117 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 J3KTA2 159 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 SULT2B1O00204 365 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 DNPH1O43598 174 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 PRSS23O95084 383 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 GLI4P10075 376 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 IMPDH2P12268 514 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 IFNA8P32881 189 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 DIO1P49895 249 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 NUP107P57740 925 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 CSNK2A1P68400 391 aaPredicted RBP13.46□□□□□ -0.25
HSPG2-201ENST00000374673 VLDLRP98155 873 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 ST3GAL3Q11203 375 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 MYBPHQ13203 477 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 FLOT2Q14254 428 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 PON3Q15166 354 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 ZNF239Q16600 458 aaKnown RBP13.46□□□□□ -0.25
HSPG2-201ENST00000374673 IQCCQ4KMZ1 466 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 OFCC1Q8IZS5 231 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 RNF217Q8TC41 542 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 CCDC120Q96HB5 630 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 ZNF300Q96RE9 604 aaPredicted RBP13.46□□□□□ -0.25
HSPG2-201ENST00000374673 TMEM43Q9BTV4 400 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 ZNF426Q9BUY5 554 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 SRXN1Q9BYN0 137 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 MAGIXQ9H6Y5 334 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 RIMS3Q9UJD0 308 aa13.46□□□□□ -0.25
HSPG2-201ENST00000374673 ERRFI1Q9UJM3 462 aaPredicted RBP13.46□□□□□ -0.25
HSPG2-201ENST00000374673 MCTS1Q9ULC4 181 aaKnown RBP13.46□□□□□ -0.25
HSPG2-201ENST00000374673 PRRC2CQ9Y520 2896 aaKnown RBP13.46□□□□□ -0.26
HSPG2-201ENST00000374673 MED12LQ86YW9 2145 aa13.45□□□□□ -0.26
HSPG2-201ENST00000374673 SLC22A20A6NK97 555 aa13.45□□□□□ -0.26
HSPG2-201ENST00000374673 FFAR1O14842 300 aa13.45□□□□□ -0.26
HSPG2-201ENST00000374673 FZD7O75084 574 aa13.45□□□□□ -0.26
HSPG2-201ENST00000374673 SYNGR4O95473 234 aa13.45□□□□□ -0.26
HSPG2-201ENST00000374673 TGM6O95932 706 aa13.45□□□□□ -0.26
HSPG2-201ENST00000374673 FABP3P05413 133 aa13.45□□□□□ -0.26
HSPG2-201ENST00000374673 FCGR2AP12318 317 aa13.45□□□□□ -0.26
HSPG2-201ENST00000374673 ITGA2P17301 1181 aa13.45□□□□□ -0.26
HSPG2-201ENST00000374673 RHCEP18577 417 aa13.45□□□□□ -0.26
HSPG2-201ENST00000374673 CEACAM8P31997 349 aaPredicted RBP13.45□□□□□ -0.26
HSPG2-201ENST00000374673 IDUAP35475 653 aa13.45□□□□□ -0.26
HSPG2-201ENST00000374673 YAP1P46937 504 aaKnown RBP13.45□□□□□ -0.26
HSPG2-201ENST00000374673 PER3P56645 1201 aa13.45□□□□□ -0.26
HSPG2-201ENST00000374673 ADORA2A-AS1P86434 159 aa13.45□□□□□ -0.26
HSPG2-201ENST00000374673 RIPPLY2Q5TAB7 128 aa13.45□□□□□ -0.26
HSPG2-201ENST00000374673 C1orf140Q5VVS0 124 aa13.45□□□□□ -0.26
HSPG2-201ENST00000374673 WDR88Q6ZMY6 472 aa13.45□□□□□ -0.26
HSPG2-201ENST00000374673 NCCRP1Q6ZVX7 275 aaPredicted RBP13.45□□□□□ -0.26
HSPG2-201ENST00000374673 CYP4Z1Q86W10 505 aa13.45□□□□□ -0.26
HSPG2-201ENST00000374673 LSRQ86X29 649 aaPredicted RBP13.45□□□□□ -0.26
HSPG2-201ENST00000374673 FNDC9Q8TBE3 224 aa13.45□□□□□ -0.26
HSPG2-201ENST00000374673 TM9SF2Q99805 663 aa13.45□□□□□ -0.26
HSPG2-201ENST00000374673 PTDSS2Q9BVG9 487 aa13.45□□□□□ -0.26
HSPG2-201ENST00000374673 IL1RAPQ9NPH3 570 aa13.45□□□□□ -0.26
HSPG2-201ENST00000374673 NDUFAF4Q9P032 175 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms