RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 PHF1O43189 567 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 DNAJA2O60884 412 aa17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 F12P00748 615 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 BCHEP06276 602 aa17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 DBIP07108 87 aaKnown RBP17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 SHC1P29353 583 aa17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 SLC7A1P30825 629 aa17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 CRISP3P54108 245 aa17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 CARD18P57730 90 aa17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 AGKQ53H12 422 aa17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 HSP90B2PQ58FF3 399 aa17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 NCMAPQ5T1S8 102 aa17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 FUNDC1Q8IVP5 155 aa17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 PEX5LQ8IYB4 626 aa17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 ZNF563Q8TA94 476 aa17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 OSTF1Q92882 214 aa17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 CPNE4Q96A23 557 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 ZG16BQ96DA0 208 aa17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 REXO5Q96IC2 774 aaKnown RBP17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 HS6ST2Q96MM7 605 aa17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 PAIP1Q9H074 479 aaKnown RBP17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 MTHFD2LQ9H903 347 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 CACYBPQ9HB71 228 aaKnown RBP17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 BARX1Q9HBU1 254 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 SERINC1Q9NRX5 453 aa17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 DCTN4Q9UJW0 460 aa17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 PCDHB14Q9Y5E9 798 aa17.02■□□□□ 0.32
TRAPPC3-204ENST00000373166 ADAM11O75078 769 aa17.01■□□□□ 0.31
TRAPPC3-204ENST00000373166 IGHV4-39P01824 125 aa17.01■□□□□ 0.31
TRAPPC3-204ENST00000373166 FAM157CP0CG43 387 aa17.01■□□□□ 0.31
TRAPPC3-204ENST00000373166 IL7RP16871 459 aa17.01■□□□□ 0.31
TRAPPC3-204ENST00000373166 NCF2P19878 526 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC3-204ENST00000373166 RPS4Y1P22090 263 aaKnown RBP17.01■□□□□ 0.31
TRAPPC3-204ENST00000373166 AGTR1P30556 359 aa17.01■□□□□ 0.31
TRAPPC3-204ENST00000373166 RYKP34925 604 aa17.01■□□□□ 0.31
TRAPPC3-204ENST00000373166 MERTKQ12866 999 aa17.01■□□□□ 0.31
TRAPPC3-204ENST00000373166 ZNF239Q16600 458 aaKnown RBP17.01■□□□□ 0.31
TRAPPC3-204ENST00000373166 TMEM176BQ3YBM2 270 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC3-204ENST00000373166 ZNF672Q499Z4 452 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC3-204ENST00000373166 DNM1P46Q6ZS02 220 aa17.01■□□□□ 0.31
TRAPPC3-204ENST00000373166 HSD17B8Q92506 261 aa17.01■□□□□ 0.31
TRAPPC3-204ENST00000373166 ACER3Q9NUN7 267 aa17.01■□□□□ 0.31
TRAPPC3-204ENST00000373166 A0A0G2JND7 137 aa17■□□□□ 0.31
TRAPPC3-204ENST00000373166 CLDN24A6NM45 220 aa17■□□□□ 0.31
TRAPPC3-204ENST00000373166 CLIC1O00299 241 aa17■□□□□ 0.31
TRAPPC3-204ENST00000373166 EFNA2O43921 213 aa17■□□□□ 0.31
TRAPPC3-204ENST00000373166 BCAS1O75363 584 aaPredicted RBP17■□□□□ 0.31
TRAPPC3-204ENST00000373166 PABPC4LP0CB38 370 aaKnown RBP17■□□□□ 0.31
TRAPPC3-204ENST00000373166 UQCRBP14927 111 aa17■□□□□ 0.31
TRAPPC3-204ENST00000373166 PPIBP23284 216 aaKnown RBP17■□□□□ 0.31
TRAPPC3-204ENST00000373166 IL32P24001 234 aa17■□□□□ 0.31
TRAPPC3-204ENST00000373166 SESN3P58005 492 aa17■□□□□ 0.31
TRAPPC3-204ENST00000373166 FAPQ12884 760 aa17■□□□□ 0.31
TRAPPC3-204ENST00000373166 FADDQ13158 208 aa17■□□□□ 0.31
TRAPPC3-204ENST00000373166 LIN52Q52LA3 116 aa17■□□□□ 0.31
TRAPPC3-204ENST00000373166 LRIF1Q5T3J3 769 aa17■□□□□ 0.31
TRAPPC3-204ENST00000373166 SLC25A43Q8WUT9 341 aaPredicted RBP17■□□□□ 0.31
TRAPPC3-204ENST00000373166 ZNF524Q96C55 264 aa17■□□□□ 0.31
TRAPPC3-204ENST00000373166 USB1Q9BQ65 265 aaKnown RBP17■□□□□ 0.31
TRAPPC3-204ENST00000373166 ALG2Q9H553 416 aa17■□□□□ 0.31
TRAPPC3-204ENST00000373166 CDC42EP3Q9UKI2 254 aa17■□□□□ 0.31
TRAPPC3-204ENST00000373166 SPIN1Q9Y657 262 aaPredicted RBP17■□□□□ 0.31
TRAPPC3-204ENST00000373166 DSPPQ9NZW4 1301 aa16.99■□□□□ 0.31
TRAPPC3-204ENST00000373166 THBS1P07996 1170 aa16.99■□□□□ 0.31
TRAPPC3-204ENST00000373166 TFPTP0C1Z6 253 aa16.99■□□□□ 0.31
TRAPPC3-204ENST00000373166 TROVE2P10155 538 aaKnown RBP eCLIP16.99■□□□□ 0.31
TRAPPC3-204ENST00000373166 HOXB9P17482 250 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC3-204ENST00000373166 RGNQ15493 299 aa16.99■□□□□ 0.31
TRAPPC3-204ENST00000373166 TAB1Q15750 504 aa16.99■□□□□ 0.31
TRAPPC3-204ENST00000373166 TMEM201Q5SNT2 666 aa16.99■□□□□ 0.31
TRAPPC3-204ENST00000373166 SFRP5Q5T4F7 317 aa16.99■□□□□ 0.31
TRAPPC3-204ENST00000373166 MRPL2Q5T653 305 aaKnown RBP16.99■□□□□ 0.31
TRAPPC3-204ENST00000373166 GRINAQ7Z429 371 aa16.99■□□□□ 0.31
TRAPPC3-204ENST00000373166 GABRG1Q8N1C3 465 aa16.99■□□□□ 0.31
TRAPPC3-204ENST00000373166 SLC38A5Q8WUX1 472 aa16.99■□□□□ 0.31
TRAPPC3-204ENST00000373166 CNOT9Q92600 299 aaKnown RBP16.99■□□□□ 0.31
TRAPPC3-204ENST00000373166 NEUROG1Q92886 237 aa16.99■□□□□ 0.31
TRAPPC3-204ENST00000373166 TMEM19Q96HH6 336 aa16.99■□□□□ 0.31
TRAPPC3-204ENST00000373166 RHNO1Q9BSD3 238 aa16.99■□□□□ 0.31
TRAPPC3-204ENST00000373166 SRXN1Q9BYN0 137 aa16.99■□□□□ 0.31
TRAPPC3-204ENST00000373166 COQ10BQ9H8M1 238 aa16.99■□□□□ 0.31
TRAPPC3-204ENST00000373166 ABCA1O95477 2261 aa16.98■□□□□ 0.31
TRAPPC3-204ENST00000373166 NDUFS7O75251 213 aa16.98■□□□□ 0.31
TRAPPC3-204ENST00000373166 GCM2O75603 506 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC3-204ENST00000373166 APOBEC1P41238 236 aaKnown RBP16.98■□□□□ 0.31
TRAPPC3-204ENST00000373166 PLAURQ03405 335 aa16.98■□□□□ 0.31
TRAPPC3-204ENST00000373166 RNPS1Q15287 305 aaKnown RBP16.98■□□□□ 0.31
TRAPPC3-204ENST00000373166 TSC22D1Q15714 1073 aa16.98■□□□□ 0.31
TRAPPC3-204ENST00000373166 MAPK11Q15759 364 aa16.98■□□□□ 0.31
TRAPPC3-204ENST00000373166 PGGHGQ32M88 737 aa16.98■□□□□ 0.31
TRAPPC3-204ENST00000373166 ZNF440Q8IYI8 595 aa16.98■□□□□ 0.31
TRAPPC3-204ENST00000373166 OR52P1PQ8NH57 321 aa16.98■□□□□ 0.31
TRAPPC3-204ENST00000373166 RNF128Q8TEB7 428 aa16.98■□□□□ 0.31
TRAPPC3-204ENST00000373166 ROBO4Q8WZ75 1007 aa16.98■□□□□ 0.31
TRAPPC3-204ENST00000373166 OR5B2Q96R09 309 aa16.98■□□□□ 0.31
TRAPPC3-204ENST00000373166 A4GALTQ9NPC4 353 aa16.98■□□□□ 0.31
TRAPPC3-204ENST00000373166 MED4Q9NPJ6 270 aa16.98■□□□□ 0.31
TRAPPC3-204ENST00000373166 SLC52A3Q9NQ40 469 aa16.98■□□□□ 0.31
TRAPPC3-204ENST00000373166 FAIMQ9NVQ4 179 aa16.98■□□□□ 0.31
TRAPPC3-204ENST00000373166 SLC25A37Q9NYZ2 338 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms