RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 SPTAN1Q13813 2472 aaKnown RBP12.35□□□□□ -0.43
SSR4-202ENST00000370085 NCOA6Q14686 2063 aaPredicted RBP12.35□□□□□ -0.43
SSR4-202ENST00000370085 TRAPPC13A5PLN9 417 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 WIPF3A6NGB9 483 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 EFNA2O43921 213 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 EIF1BO60739 113 aaKnown RBP12.35□□□□□ -0.43
SSR4-202ENST00000370085 CLDN14O95500 239 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 PMS2P2O95744 297 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 GPIP06744 558 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 TMIGD3P0DMS9 266 aaPredicted RBP12.35□□□□□ -0.43
SSR4-202ENST00000370085 NCK1P16333 377 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 ENPP1P22413 925 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 CTSSP25774 331 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 GTF2E2P29084 291 aaKnown RBP12.35□□□□□ -0.43
SSR4-202ENST00000370085 CEACAM8P31997 349 aaPredicted RBP12.35□□□□□ -0.43
SSR4-202ENST00000370085 IDUAP35475 653 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 DIO1P49895 249 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 TAS2R41P59536 307 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 SLC35A1P78382 337 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 ADORA2A-AS1P86434 159 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 RNPS1Q15287 305 aaKnown RBP12.35□□□□□ -0.43
SSR4-202ENST00000370085 IFI44LQ53G44 452 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 MTX3Q5HYI7 312 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 ENTPD8Q5MY95 495 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 C6orf89Q6UWU4 347 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 DEF8Q6ZN54 512 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 ATG4DQ86TL0 474 aaPredicted RBP12.35□□□□□ -0.43
SSR4-202ENST00000370085 CYP4Z1Q86W10 505 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 RPRMLQ8N4K4 120 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 MARVELD2Q8N4S9 558 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 FNDC9Q8TBE3 224 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 ZNF845Q96IR2 970 aaPredicted RBP12.35□□□□□ -0.43
SSR4-202ENST00000370085 TACO1Q9BSH4 297 aaKnown RBP12.35□□□□□ -0.43
SSR4-202ENST00000370085 NAA11Q9BSU3 229 aaPredicted RBP12.35□□□□□ -0.43
SSR4-202ENST00000370085 SFXN3Q9BWM7 321 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 PCDHAC1Q9H158 963 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 RNF6Q9Y252 685 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 EMC9Q9Y3B6 208 aa12.35□□□□□ -0.43
SSR4-202ENST00000370085 A0A0B4J2E0 115 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 A0A0G2JNJ9 132 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 A0A1B0GX12 115 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 A0A1W2PNR3 127 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 TMEM72A0PK05 275 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 CPSF4LA6NMK7 179 aaKnown RBP12.34□□□□□ -0.43
SSR4-202ENST00000370085 CHP2O43745 196 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 OR2T1O43869 369 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 AHSA1O95433 338 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 IL18BPO95998 194 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 HTR2AP28223 471 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 SHC1P29353 583 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 CRYBA2P53672 197 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 CTBP2P56545 445 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 OR2B6P58173 313 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 BNIP1Q12981 228 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 MYBPHQ13203 477 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 FXNQ16595 210 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 ZNF239Q16600 458 aaKnown RBP12.34□□□□□ -0.43
SSR4-202ENST00000370085 SLC25A35Q3KQZ1 300 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 FCRLAQ7L513 359 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 COMTD1Q86VU5 262 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 C9orf106Q8NAJ2 232 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 FAM156AQ8NDB6 213 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 ADAMTS16Q8TE57 1224 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 ITLN2Q8WWU7 325 aaPredicted RBP12.34□□□□□ -0.43
SSR4-202ENST00000370085 SLC38A4Q969I6 547 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 MCUR1Q96AQ8 359 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 ZNF524Q96C55 264 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 INTS12Q96CB8 462 aaKnown RBP12.34□□□□□ -0.43
SSR4-202ENST00000370085 GMPPAQ96IJ6 420 aaPredicted RBP12.34□□□□□ -0.43
SSR4-202ENST00000370085 MPP4Q96JB8 637 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 BTBD10Q9BSF8 475 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 THTPAQ9BU02 230 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 TRIM15Q9C019 465 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 OR11A1Q9GZK7 315 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 RNF122Q9H9V4 155 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 GP6Q9HCN6 339 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 KCNJ16Q9NPI9 418 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 DCAF13Q9NV06 445 aaKnown RBP12.34□□□□□ -0.43
SSR4-202ENST00000370085 ACTR3BQ9P1U1 418 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 KLHL9Q9P2J3 617 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 GMPR2Q9P2T1 348 aaKnown RBP12.34□□□□□ -0.43
SSR4-202ENST00000370085 Q9UFV3 132 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 PACSIN3Q9UKS6 424 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 FAM32AQ9Y421 112 aaKnown RBP12.34□□□□□ -0.43
SSR4-202ENST00000370085 MPDZO75970 2070 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 MED12LQ86YW9 2145 aa12.34□□□□□ -0.43
SSR4-202ENST00000370085 INTS1Q8N201 2190 aaKnown RBP12.33□□□□□ -0.44
SSR4-202ENST00000370085 A0A087WUJ7 227 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 ARPC2O15144 300 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 PRKD3O94806 890 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 OR5F1O95221 314 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 TGM6O95932 706 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 THRBP10828 461 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 ITGA2P17301 1181 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 BMP5P22003 454 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 OR1E2P47887 323 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 CBX1P83916 185 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 SRSF1Q07955 248 aaKnown RBP eCLIP12.33□□□□□ -0.44
SSR4-202ENST00000370085 CEACAM7Q14002 265 aa12.33□□□□□ -0.44
SSR4-202ENST00000370085 TRIM25Q14258 630 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms