RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 CRYZQ08257 329 aaKnown RBP9.9□□□□□ -0.82
BRCC3-204ENST00000369462 RNFT1Q5M7Z0 435 aa9.9□□□□□ -0.82
BRCC3-204ENST00000369462 WIPI1Q5MNZ9 446 aaPredicted RBP9.9□□□□□ -0.82
BRCC3-204ENST00000369462 FAHD1Q6P587 224 aa9.9□□□□□ -0.82
BRCC3-204ENST00000369462 FAM98AQ8NCA5 519 aaKnown RBP9.9□□□□□ -0.82
BRCC3-204ENST00000369462 FAM46AQ96IP4 442 aaKnown RBP9.9□□□□□ -0.82
BRCC3-204ENST00000369462 GPA33Q99795 319 aa9.9□□□□□ -0.82
BRCC3-204ENST00000369462 OR11A1Q9GZK7 315 aa9.9□□□□□ -0.82
BRCC3-204ENST00000369462 GABARAPL1Q9H0R8 117 aa9.9□□□□□ -0.82
BRCC3-204ENST00000369462 ZNF556Q9HAH1 456 aa9.9□□□□□ -0.82
BRCC3-204ENST00000369462 BSNQ9UPA5 3926 aa9.9□□□□□ -0.83
BRCC3-204ENST00000369462 NBEAQ8NFP9 2946 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 TMEM72A0PK05 275 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 OR2M5A3KFT3 312 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 ARRDC5A6NEK1 342 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 H3BML4 177 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 GPR4P46093 362 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 OMPP47874 163 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 C1QL3Q5VWW1 255 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 C1orf94Q6P1W5 598 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 GALNT5Q7Z7M9 940 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 SLC22A16Q86VW1 577 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 BPIFA2Q96DR5 249 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 PIGQQ9BRB3 760 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 TMEM43Q9BTV4 400 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 SERINC1Q9NRX5 453 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 ZNF407Q9C0G0 2248 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 NCKAP5O14513 1909 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 ATRXP46100 2492 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 DNAJC13O75165 2243 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 A8MVM7 634 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 ACOT7O00154 380 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 MITFO75030 526 aaPredicted RBP9.89□□□□□ -0.83
BRCC3-204ENST00000369462 IGFBP5P24593 272 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 ALDH6A1Q02252 535 aaKnown RBP9.89□□□□□ -0.83
BRCC3-204ENST00000369462 HYAL4Q2M3T9 481 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 PLEKHN1Q494U1 663 aaPredicted RBP9.89□□□□□ -0.83
BRCC3-204ENST00000369462 KDM4DQ6B0I6 523 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 C19orf48Q6RUI8 117 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 IZUMO2Q6UXV1 221 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 CDK20Q8IZL9 346 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 PACRGLQ8N7B6 248 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 C9orf43Q8TAL5 461 aaPredicted RBP9.89□□□□□ -0.83
BRCC3-204ENST00000369462 KTI12Q96EK9 354 aaPredicted RBP9.89□□□□□ -0.83
BRCC3-204ENST00000369462 DTNBP1Q96EV8 351 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 PSD2Q9BQI7 771 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 SLC19A3Q9BZV2 496 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 PRORYQ9H606 182 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 KRT84Q9NSB2 600 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 LUZP4Q9P127 313 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 TMEFF2Q9UIK5 374 aaPredicted RBP9.89□□□□□ -0.83
BRCC3-204ENST00000369462 MGAT4BQ9UQ53 548 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 MRPS18CQ9Y3D5 142 aaKnown RBP9.89□□□□□ -0.83
BRCC3-204ENST00000369462 ZNF337Q9Y3M9 751 aa9.89□□□□□ -0.83
BRCC3-204ENST00000369462 C7orf72A4D263 438 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 ENO4A6NNW6 628 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 LRRN3E7EW58 273 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 CDC42EP2O14613 210 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 ADAP00813 363 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 TFPIP10646 304 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 MAKP20794 623 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 AQP4P55087 323 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 PRKCDQ05655 676 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 TMEM44Q2T9K0 475 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.88□□□□□ -0.83
BRCC3-204ENST00000369462 C3orf33Q6P1S2 294 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 ARL5BQ96KC2 179 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 SFXN2Q96NB2 322 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 OR2B2Q9GZK3 357 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 KRCC1Q9NPI7 259 aaPredicted RBP9.88□□□□□ -0.83
BRCC3-204ENST00000369462 USE1Q9NZ43 259 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 CH25HO95992 272 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 HPNP05981 417 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 SAGP10523 405 aaPredicted RBP9.88□□□□□ -0.83
BRCC3-204ENST00000369462 ZNF24P17028 368 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 FUT1P19526 365 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 SFTPDP35247 375 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 RPS5P46782 204 aaKnown RBP9.88□□□□□ -0.83
BRCC3-204ENST00000369462 MAP2K6P52564 334 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 B3GALT5-AS1P59052 145 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 SELENBP1Q13228 472 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 SLC10A1Q14973 349 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 ZIK1Q3SY52 487 aaPredicted RBP9.88□□□□□ -0.83
BRCC3-204ENST00000369462 GLYR1Q49A26 553 aaPredicted RBP9.88□□□□□ -0.83
BRCC3-204ENST00000369462 SYT14P1Q58G82 188 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 SLC6A19Q695T7 634 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 FAM109AQ8N4B1 249 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 C10orf53Q8N6V4 93 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 SMPDL3BQ92485 455 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 TAAR8Q969N4 342 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 DGCR6LQ9BY27 220 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 DEFB127Q9H1M4 99 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 TSPAN10Q9H1Z9 355 aaPredicted RBP9.88□□□□□ -0.83
BRCC3-204ENST00000369462 C8orf4Q9NR00 106 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 ORC6Q9Y5N6 252 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 NPIPB7O75200 414 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 PEX14O75381 377 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 SNAP29O95721 258 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 HPRP00739 348 aa9.88□□□□□ -0.83
BRCC3-204ENST00000369462 ZNF17P17021 662 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms