RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 SPATC1Q76KD6 591 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 Q96M85 177 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 MESP1Q9BRJ9 268 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 PELOQ9BRX2 385 aaKnown RBP12.67□□□□□ -0.38
SHC1-202ENST00000368445 RPRD1BQ9NQG5 326 aaKnown RBP12.67□□□□□ -0.38
SHC1-202ENST00000368445 SACM1LQ9NTJ5 587 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 ZNF223Q9UK11 482 aaPredicted RBP12.67□□□□□ -0.38
SHC1-202ENST00000368445 RTTNQ86VV8 2226 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 TAF4O00268 1085 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 GABRPO00591 440 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 BHLHE40O14503 412 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 RPS4Y1P22090 263 aaKnown RBP12.67□□□□□ -0.38
SHC1-202ENST00000368445 TACR3P29371 465 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 STARD6P59095 220 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 CFHR1Q03591 330 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 CD300CQ08708 224 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 LEG1Q6P5S2 330 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 TUBA3EQ6PEY2 450 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 LYPD4Q6UWN0 246 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 MROQ9BYG7 248 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 DVL2O14641 736 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 HEXBP07686 556 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 PSMB10P40306 273 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 LGALS3BPQ08380 585 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 FUT7Q11130 342 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 OXA1LQ15070 435 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 RNASE12Q5GAN4 147 aaKnown RBP12.67□□□□□ -0.38
SHC1-202ENST00000368445 ARHGAP11AQ6P4F7 1023 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 NANOGNBQ7Z5D8 188 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 CEACAM19Q7Z692 300 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 DEFB123Q8N688 67 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 OR5W2Q8NH69 310 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 AP3S1Q92572 193 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 DCLRE1CQ96SD1 692 aaKnown RBP12.67□□□□□ -0.38
SHC1-202ENST00000368445 CCDC86Q9H6F5 360 aaKnown RBP12.67□□□□□ -0.38
SHC1-202ENST00000368445 IKZF2Q9UKS7 526 aa12.67□□□□□ -0.38
SHC1-202ENST00000368445 ZNF346Q9UL40 294 aaKnown RBP12.67□□□□□ -0.38
SHC1-202ENST00000368445 FMO6PO60774 539 aa12.66□□□□□ -0.38
SHC1-202ENST00000368445 OR6A2O95222 327 aa12.66□□□□□ -0.38
SHC1-202ENST00000368445 GABRA5P31644 462 aa12.66□□□□□ -0.38
SHC1-202ENST00000368445 PLAURQ03405 335 aa12.66□□□□□ -0.38
SHC1-202ENST00000368445 FAM69BQ5VUD6 431 aa12.66□□□□□ -0.38
SHC1-202ENST00000368445 CCBE1Q6UXH8 406 aaPredicted RBP12.66□□□□□ -0.38
SHC1-202ENST00000368445 APOOLQ6UXV4 268 aa12.66□□□□□ -0.38
SHC1-202ENST00000368445 ZNF615Q8N8J6 731 aa12.66□□□□□ -0.38
SHC1-202ENST00000368445 MOSPD2Q8NHP6 518 aa12.66□□□□□ -0.38
SHC1-202ENST00000368445 DUSP19Q8WTR2 217 aa12.66□□□□□ -0.38
SHC1-202ENST00000368445 SLC46A1Q96NT5 459 aa12.66□□□□□ -0.38
SHC1-202ENST00000368445 TEX13CA0A0J9YWL9 993 aa12.66□□□□□ -0.38
SHC1-202ENST00000368445 A0A1B0GX78 115 aa12.66□□□□□ -0.38
SHC1-202ENST00000368445 E9PI62 339 aa12.66□□□□□ -0.38
SHC1-202ENST00000368445 KLF4O43474 513 aa12.66□□□□□ -0.38
SHC1-202ENST00000368445 TBXA2RP21731 343 aa12.66□□□□□ -0.38
SHC1-202ENST00000368445 SLC37A1P57057 533 aa12.66□□□□□ -0.38
SHC1-202ENST00000368445 ZNF511Q8NB15 262 aa12.66□□□□□ -0.38
SHC1-202ENST00000368445 DRAXINQ8NBI3 349 aaPredicted RBP12.66□□□□□ -0.38
SHC1-202ENST00000368445 ASB6Q9NWX5 421 aa12.66□□□□□ -0.38
SHC1-202ENST00000368445 SBK2P0C263 348 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 PPICP45877 212 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 TPBGQ13641 420 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 IL20RBQ6UXL0 311 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 STT3BQ8TCJ2 826 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 C3orf49Q96BT1 292 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 VN1R1Q9GZP7 353 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 TVP23AA6NH52 213 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 EFCAB7A8K855 629 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 OPN1LWP04000 364 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 RPS27P42677 84 aaKnown RBP12.65□□□□□ -0.38
SHC1-202ENST00000368445 TPTEP56180 551 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 ELAVL1Q15717 326 aaKnown RBP12.65□□□□□ -0.38
SHC1-202ENST00000368445 SLC25A30Q5SVS4 291 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 WBP2NLQ6ICG8 309 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 SYT9Q86SS6 491 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 ZNF433Q8N7K0 673 aaPredicted RBP12.65□□□□□ -0.38
SHC1-202ENST00000368445 C19orf18Q8NEA5 215 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 C8orf44Q96CB5 159 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 GAREM1Q9H706 876 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 MCCC2Q9HCC0 563 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 TEKT2Q9UIF3 430 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 C4orf47A7E2U8 309 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 PPM1BO75688 479 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 SHC1P29353 583 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 MAP3K8P41279 467 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 EFNB1P98172 346 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 E2F1Q01094 437 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 TBC1D25Q3MII6 688 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 ALG10Q5BKT4 473 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 TRIQKQ629K1 86 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 OGFOD3Q6PK18 319 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 OR13C5Q8NGS8 318 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 HDHD2Q9H0R4 259 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 KCNN2Q9H2S1 579 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 LANCL2Q9NS86 450 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 TBCCD1Q9NVR7 557 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 GRHPRQ9UBQ7 328 aa12.65□□□□□ -0.38
SHC1-202ENST00000368445 CFAP54Q96N23 3096 aa12.64□□□□□ -0.39
SHC1-202ENST00000368445 ARHGEF9O43307 516 aa12.64□□□□□ -0.39
SHC1-202ENST00000368445 HPGDSO60760 199 aa12.64□□□□□ -0.39
SHC1-202ENST00000368445 POU3F3P20264 500 aaPredicted RBP12.64□□□□□ -0.39
SHC1-202ENST00000368445 MYL9P24844 172 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms