RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 ITGA5P08648 1049 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 LBPP18428 481 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 PTNP21246 168 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 CD40P25942 277 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 S100A3P33764 101 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 CHI3L1P36222 383 aaPredicted RBP14.08□□□□□ -0.16
CKS1B-202ENST00000368436 MAGEA8P43361 318 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 SLC1A6P48664 564 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 ZNF83P51522 516 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 FOXG1P55316 489 aaPredicted RBP14.08□□□□□ -0.16
CKS1B-202ENST00000368436 OR2B6P58173 313 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 IRX1P78414 480 aaPredicted RBP14.08□□□□□ -0.16
CKS1B-202ENST00000368436 OR7E24Q6IFN5 339 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 WDR93Q6P2C0 686 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 KLHL17Q6TDP4 642 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 CMIPQ8IY22 773 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 KIRREL3Q8IZU9 778 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 OR10H5Q8NGA6 315 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 PMM1Q92871 262 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 DNAJA3Q96EY1 480 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 ADAD1Q96M93 576 aaKnown RBP14.08□□□□□ -0.16
CKS1B-202ENST00000368436 TRNT1Q96Q11 434 aaKnown RBP14.08□□□□□ -0.16
CKS1B-202ENST00000368436 RHNO1Q9BSD3 238 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 CACNG6Q9BXT2 260 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 AMBRA1Q9C0C7 1298 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 SLC38A1Q9H2H9 487 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 CBLN4Q9NTU7 201 aa14.08□□□□□ -0.16
CKS1B-202ENST00000368436 ALPK2Q86TB3 2170 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 ATRQ13535 2644 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 A0A096LNT2 108 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 TMED7-TICAM2A0A0A6YYA0 188 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 E9PBE3 544 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 FAAHO00519 579 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 TM9SF1O15321 606 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 EIF1BO60739 113 aaKnown RBP14.07□□□□□ -0.16
CKS1B-202ENST00000368436 IMPDH2P12268 514 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 CCNA2P20248 432 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 RPS4Y1P22090 263 aaKnown RBP14.07□□□□□ -0.16
CKS1B-202ENST00000368436 MAP2K6P52564 334 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 SLC35A1P78382 337 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 TXNL4AP83876 142 aaKnown RBP14.07□□□□□ -0.16
CKS1B-202ENST00000368436 HPCAP84074 193 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 SPOCK1Q08629 439 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 SYPL1Q16563 259 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 FAM174BQ3ZCQ3 159 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 OGFOD2Q6N063 350 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 SLC22A25Q6T423 547 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 B3GLCTQ6Y288 498 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 LRRC74BQ6ZQY2 392 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 RNF130Q86XS8 419 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 MREGQ8N565 214 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 ANKFN1Q8N957 763 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 WDR31Q8NA23 367 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 TEX37Q96LM6 180 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 NUF2Q9BZD4 464 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 MTHFD2LQ9H903 347 aaPredicted RBP14.07□□□□□ -0.16
CKS1B-202ENST00000368436 MEAF6Q9HAF1 191 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 YAE1D1Q9NRH1 226 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 OSGIN1Q9UJX0 560 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 TMED7Q9Y3B3 224 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 FLVCR1Q9Y5Y0 555 aa14.07□□□□□ -0.16
CKS1B-202ENST00000368436 FBN3Q75N90 2809 aa14.06□□□□□ -0.16
CKS1B-202ENST00000368436 IGHV4-30-2A0A087WSY4 118 aa14.06□□□□□ -0.16
CKS1B-202ENST00000368436 A0A1W2PR80 420 aa14.06□□□□□ -0.16
CKS1B-202ENST00000368436 TMEM72A0PK05 275 aa14.06□□□□□ -0.16
CKS1B-202ENST00000368436 CCDC154A6NI56 674 aa14.06□□□□□ -0.16
CKS1B-202ENST00000368436 RGS16O15492 202 aaPredicted RBP14.06□□□□□ -0.16
CKS1B-202ENST00000368436 CHRM4P08173 479 aa14.06□□□□□ -0.16
CKS1B-202ENST00000368436 TACR3P29371 465 aa14.06□□□□□ -0.16
CKS1B-202ENST00000368436 SLC1A3P43003 542 aa14.06□□□□□ -0.16
CKS1B-202ENST00000368436 POLR2HP52434 150 aaKnown RBP14.06□□□□□ -0.16
CKS1B-202ENST00000368436 DSCR9P59020 149 aa14.06□□□□□ -0.16
CKS1B-202ENST00000368436 UFM1P61960 85 aa14.06□□□□□ -0.16
CKS1B-202ENST00000368436 MPP2Q14168 576 aa14.06□□□□□ -0.16
CKS1B-202ENST00000368436 SLC17A1Q14916 467 aa14.06□□□□□ -0.16
CKS1B-202ENST00000368436 KRT71Q3SY84 523 aa14.06□□□□□ -0.16
CKS1B-202ENST00000368436 C1QTNF12Q5T7M4 302 aa14.06□□□□□ -0.16
CKS1B-202ENST00000368436 FBXL14Q8N1E6 418 aa14.06□□□□□ -0.16
CKS1B-202ENST00000368436 MUC15Q8N387 334 aa14.06□□□□□ -0.16
CKS1B-202ENST00000368436 C1orf162Q8NEQ5 155 aaPredicted RBP14.06□□□□□ -0.16
CKS1B-202ENST00000368436 OR52E4Q8NGH9 312 aa14.06□□□□□ -0.16
CKS1B-202ENST00000368436 DDIT4LQ96D03 193 aa14.06□□□□□ -0.16
CKS1B-202ENST00000368436 NAA11Q9BSU3 229 aaPredicted RBP14.06□□□□□ -0.16
CKS1B-202ENST00000368436 PNPOQ9NVS9 261 aa14.06□□□□□ -0.16
CKS1B-202ENST00000368436 PARPBPQ9NWS1 579 aa14.06□□□□□ -0.16
CKS1B-202ENST00000368436 DCTN4Q9UJW0 460 aa14.06□□□□□ -0.16
CKS1B-202ENST00000368436 SLC9A8Q9Y2E8 581 aa14.06□□□□□ -0.16
CKS1B-202ENST00000368436 ELOA3DA6NLF2 546 aaPredicted RBP14.05□□□□□ -0.16
CKS1B-202ENST00000368436 M0R1B8 84 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 ALDOCP09972 364 aaKnown RBP14.05□□□□□ -0.16
CKS1B-202ENST00000368436 BGNP21810 368 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 FABP6P51161 128 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 NUDT6P53370 316 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 STX3Q13277 289 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 ELOA3BQ3SY89 546 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 TNFAIP8L3Q5GJ75 292 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 TSPO2Q5TGU0 170 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 HMBOX1Q6NT76 420 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 ZNF544Q6NX49 715 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 PAQR6Q6TCH4 344 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms