RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 IRF4Q15306 451 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 GRK1Q15835 563 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 ALG11Q2TAA5 492 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 EIPR1Q53HC9 387 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 FAM69AQ5T7M9 428 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 GPR139Q6DWJ6 353 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 HEPHL1Q6MZM0 1159 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 NIPAL3Q6P499 406 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 CXXC5Q7LFL8 322 aaKnown RBP10.63□□□□□ -0.71
USF1-201ENST00000368019 UBE3DQ7Z6J8 389 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 PXKQ7Z7A4 578 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 C11orf96Q7Z7L8 435 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 LHFPL3Q86UP9 236 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 GLCCI1Q86VQ1 547 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 ZNF547Q8IVP9 402 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 SDR16C5Q8N3Y7 309 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 ARL14Q8N4G2 192 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 MS4A15Q8N5U1 240 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 SRFBP1Q8NEF9 429 aaKnown RBP10.63□□□□□ -0.71
USF1-201ENST00000368019 OR4M2Q8NGB6 313 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 OR4F15Q8NGB8 312 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 OR8H1Q8NGG4 311 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 OR5K2Q8NHB8 316 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 LRRC20Q8TCA0 184 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 HAVCR2Q8TDQ0 301 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 DPH7Q9BTV6 452 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 MENTQ9BUN1 341 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 C1QTNF7Q9BXJ2 289 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 SLC38A1Q9H2H9 487 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 CLEC4MQ9H2X3 399 aaPredicted RBP10.63□□□□□ -0.71
USF1-201ENST00000368019 HEXA-AS1Q9H8Q6 139 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 PLEKHA1Q9HB21 404 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 PRDM9Q9NQV7 894 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 TEX10Q9NXF1 929 aaPredicted RBP10.63□□□□□ -0.71
USF1-201ENST00000368019 HAO2Q9NYQ3 351 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 AKAP7Q9P0M2 348 aaPredicted RBP10.63□□□□□ -0.71
USF1-201ENST00000368019 TAC3Q9UHF0 121 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 NAV2Q8IVL1 2488 aa10.63□□□□□ -0.71
USF1-201ENST00000368019 A0A0G2JK05 382 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 TEX13CA0A0J9YWL9 993 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 A0A1W2PQM1 296 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 RPS10-NUDT3A0A1W2PQS6 291 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 CD8B2A6NJW9 211 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 RTCAO00442 366 aaKnown RBP10.62□□□□□ -0.71
USF1-201ENST00000368019 MT-ND5P03915 603 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 TCRBP04435 133 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 THBS1P07996 1170 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 CD8BP10966 210 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 CSNK2A2P19784 350 aaPredicted RBP10.62□□□□□ -0.71
USF1-201ENST00000368019 TEAD1P28347 426 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 UQCRC1P31930 480 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 AHRP35869 848 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 CD79BP40259 229 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 BLKP51451 505 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 NCBP2P52298 156 aaKnown RBP eCLIP10.62□□□□□ -0.71
USF1-201ENST00000368019 ACTC1P68032 377 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 ACTA1P68133 377 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 POU4F2Q12837 409 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 ELOCQ15369 112 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 ZNF791Q3KP31 576 aaPredicted RBP10.62□□□□□ -0.71
USF1-201ENST00000368019 CDONQ4KMG0 1287 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 IDNKQ5T6J7 187 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 NDUFAF5Q5TEU4 345 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 SFXN4Q6P4A7 337 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 ADAMTSL4Q6UY14 1074 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 MEPCEQ7L2J0 689 aaKnown RBP10.62□□□□□ -0.71
USF1-201ENST00000368019 ADGRG3Q86Y34 549 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 KLBQ86Z14 1044 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 UBE2J2Q8N2K1 259 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 ZNF655Q8N720 491 aaPredicted RBP10.62□□□□□ -0.71
USF1-201ENST00000368019 LSMEM1Q8N8F7 131 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 UXS1Q8NBZ7 420 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 OR11H7Q8NGC8 314 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 OR8K5Q8NH50 307 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 OR56B4Q8NH76 319 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 TFGQ92734 400 aaPredicted RBP10.62□□□□□ -0.71
USF1-201ENST00000368019 TSACCQ96A04 125 aaPredicted RBP10.62□□□□□ -0.71
USF1-201ENST00000368019 COX14Q96I36 57 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 FAM46AQ96IP4 442 aaKnown RBP10.62□□□□□ -0.71
USF1-201ENST00000368019 BBS4Q96RK4 519 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 GFM1Q96RP9 751 aaKnown RBP10.62□□□□□ -0.71
USF1-201ENST00000368019 MRI1Q9BV20 369 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 ALG8Q9BVK2 526 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 OR2AG1Q9H205 316 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 CACYBPQ9HB71 228 aaKnown RBP10.62□□□□□ -0.71
USF1-201ENST00000368019 HINT3Q9NQE9 182 aaKnown RBP10.62□□□□□ -0.71
USF1-201ENST00000368019 LYARQ9NX58 379 aaKnown RBP10.62□□□□□ -0.71
USF1-201ENST00000368019 SLCO1C1Q9NYB5 712 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 MALT1Q9UDY8 824 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 MGAT4AQ9UM21 535 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 CAMK2AQ9UQM7 478 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 TMEM5Q9Y2B1 443 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 TMA7Q9Y2S6 64 aaKnown RBP10.62□□□□□ -0.71
USF1-201ENST00000368019 GPR52Q9Y2T5 361 aa10.62□□□□□ -0.71
USF1-201ENST00000368019 HECTD1Q9ULT8 2610 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 A0A1W2PPV9 198 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 LRRTM2O43300 516 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 FMO6PO60774 539 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 STX11O75558 287 aa10.61□□□□□ -0.71
USF1-201ENST00000368019 RASGRP1O95267 797 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms