RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 CEACAM5P06731 702 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 LCN1P31025 176 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 CXCL12P48061 93 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 MMP15P51511 669 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 OR10A3P58181 314 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 TAS2R43P59537 309 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 RPE65Q16518 533 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 PLBD1Q6P4A8 553 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 SEZ6L2Q6UXD5 910 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 MAMSTRQ6ZN01 415 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 CHMP1BQ7LBR1 199 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 RANBP3LQ86VV4 465 aaPredicted RBP13.57□□□□□ -0.24
PRKN-204ENST00000366896 FTMTQ8N4E7 242 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 TMEM99Q8N816 258 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 LSM14AQ8ND56 463 aaKnown RBP13.57□□□□□ -0.24
PRKN-204ENST00000366896 PMM1Q92871 262 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 COL26A1Q96A83 441 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 LINC00052Q96N35 136 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 PRSS27Q9BQR3 290 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 C7orf50Q9BRJ6 194 aaKnown RBP13.57□□□□□ -0.24
PRKN-204ENST00000366896 EVA1AQ9H8M9 152 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 WDR45Q9Y484 360 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 SCN3AQ9NY46 2000 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 SLC9B1P1A6NJY1 282 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 K7ESF4 209 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 TOR1AO14656 332 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 PLPP2O43688 288 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 FXYD6P3P58550 94 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 RPS15AP62244 130 aaKnown RBP13.56□□□□□ -0.24
PRKN-204ENST00000366896 NHLRC3Q5JS37 347 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 NLRC3Q7RTR2 1065 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 OR52L1Q8NGH7 329 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 OR56B4Q8NH76 319 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 ALG8Q9BVK2 526 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 HCAR1Q9BXC0 346 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 SLC17A9Q9BYT1 436 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 ACTR6Q9GZN1 396 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 ENKD1Q9H0I2 346 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 OR52D1Q9H346 318 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 OR6C2Q9NZP2 312 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 POMT2Q9UKY4 750 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 LRRC72A6NJI9 287 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 SLC22A31A6NKX4 558 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 M0R296 226 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 ZNF217O75362 1048 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 SEMA4FO95754 770 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 IFI6P09912 130 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 PRG2P13727 222 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 SELENOPP49908 381 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 DGCR2P98153 550 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 TNFRSF17Q02223 184 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 RPL6Q02878 288 aaKnown RBP13.56□□□□□ -0.24
PRKN-204ENST00000366896 BTN1A1Q13410 526 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 FAM27D1Q5T7N8 215 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 WDR88Q6ZMY6 472 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 PAQR7Q86WK9 346 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 OR4N5Q8IXE1 308 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 TEX19Q8NA77 164 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 DACT3Q96B18 629 aaPredicted RBP13.56□□□□□ -0.24
PRKN-204ENST00000366896 ARSGQ96EG1 525 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 SCARF2Q96GP6 870 aaPredicted RBP13.56□□□□□ -0.24
PRKN-204ENST00000366896 HS6ST2Q96MM7 605 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 CD180Q99467 661 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 DPH1Q9BZG8 443 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 ZNF350Q9GZX5 532 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 SHARPINQ9H0F6 387 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 ZNF275Q9NSD4 429 aaPredicted RBP13.56□□□□□ -0.24
PRKN-204ENST00000366896 SIDT1Q9NXL6 827 aaKnown RBP13.56□□□□□ -0.24
PRKN-204ENST00000366896 EMC3Q9P0I2 261 aa13.56□□□□□ -0.24
PRKN-204ENST00000366896 PPIEQ9UNP9 301 aaKnown RBP13.56□□□□□ -0.24
PRKN-204ENST00000366896 MFSD2BA6NFX1 497 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 DNAJB6O75190 326 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 UBL3O95164 117 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 RCBTB2O95199 551 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 HPXP02790 462 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 HRGP04196 525 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 IFNA16P05015 189 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 ZNF888P0CJ79 500 aaPredicted RBP13.55□□□□□ -0.24
PRKN-204ENST00000366896 TBXA2RP21731 343 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 MAT2AP31153 395 aaKnown RBP13.55□□□□□ -0.24
PRKN-204ENST00000366896 SGCGQ13326 291 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 VN1R4Q7Z5H5 301 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 SHISA5Q8N114 240 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 SLC43A2Q8N370 569 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 FRMD1Q8N878 549 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 PFN4Q8NHR9 129 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 SLC2A12Q8TD20 617 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 HAVCR2Q8TDQ0 301 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 RLN3Q8WXF3 142 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 ST8SIA4Q92187 359 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 METTL17Q9H7H0 456 aaPredicted RBP13.55□□□□□ -0.24
PRKN-204ENST00000366896 CMC2Q9NRP2 79 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 SDHAF2Q9NX18 166 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 WSB2Q9NYS7 404 aaPredicted RBP13.55□□□□□ -0.24
PRKN-204ENST00000366896 HCN3Q9P1Z3 774 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 IGHV1OR15-9A0A0B4J2B8 117 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 SC5DO75845 299 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 TOXO94900 526 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 ANKRD34CP0C6C1 535 aa13.55□□□□□ -0.24
PRKN-204ENST00000366896 SMIM10L1P0DMW3 83 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms