RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 MTX3Q5HYI7 312 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 DCST1Q5T197 706 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 WLSQ5T9L3 541 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 RIPPLY2Q5TAB7 128 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 SHEQ5VZ18 495 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 SLC30A6Q6NXT4 461 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 DEF8Q6ZN54 512 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 CXorf67Q86X51 503 aaPredicted RBP7.36□□□□□ -1.23
MRPL55-211ENST00000366738 GRAMD2AQ8IUY3 354 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 AQP12AQ8IXF9 295 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 PHC2Q8IXK0 858 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 CMIPQ8IY22 773 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 FADS6Q8N9I5 356 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 OR2M3Q8NG83 312 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 B4GALNT2Q8NHY0 566 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 NEIL3Q8TAT5 605 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 DUSP19Q8WTR2 217 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 CANT1Q8WVQ1 401 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 OIT3Q8WWZ8 545 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 PMM1Q92871 262 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 SLCO4A1Q96BD0 722 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 SARAFQ96BY9 339 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 SLC47A1Q96FL8 570 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 ZNF597Q96LX8 424 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 Q96MF0 132 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 RNF145Q96MT1 663 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 GNRHR2Q96P88 292 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 SEPHS2Q99611 448 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 TRIM15Q9C019 465 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 AMBRA1Q9C0C7 1298 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 LAT2Q9GZY6 243 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 UBQLN3Q9H347 655 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 DSN1Q9H410 356 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 CACYBPQ9HB71 228 aaKnown RBP7.36□□□□□ -1.23
MRPL55-211ENST00000366738 ACKR4Q9NPB9 350 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 CTPS2Q9NRF8 586 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 RYDENQ9NUL5 291 aaKnown RBP7.36□□□□□ -1.23
MRPL55-211ENST00000366738 BEX4Q9NWD9 120 aaPredicted RBP7.36□□□□□ -1.23
MRPL55-211ENST00000366738 RPS6KA6Q9UK32 745 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 ICAM5Q9UMF0 924 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 SH3GLB1Q9Y371 365 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 ARHGAP21Q5T5U3 1957 aa7.36□□□□□ -1.23
MRPL55-211ENST00000366738 DHRS12A0PJE2 317 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 CPSF4LA6NMK7 179 aaKnown RBP7.35□□□□□ -1.23
MRPL55-211ENST00000366738 CLCA1A8K7I4 914 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 H3BNH8 94 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 GTPBP1O00178 669 aaKnown RBP7.35□□□□□ -1.23
MRPL55-211ENST00000366738 ENTPD5O75356 428 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 DIRAS1O95057 198 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 SNX4O95219 450 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 STAMBPO95630 424 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 IFNA14P01570 189 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 THY1P04216 161 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 PTNP21246 168 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 BMP5P22003 454 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 CEACAM8P31997 349 aaPredicted RBP7.35□□□□□ -1.23
MRPL55-211ENST00000366738 RYKP34925 604 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 ACAA2P42765 397 aaKnown RBP7.35□□□□□ -1.23
MRPL55-211ENST00000366738 YAP1P46937 504 aaKnown RBP7.35□□□□□ -1.23
MRPL55-211ENST00000366738 CLK3P49761 638 aaKnown RBP7.35□□□□□ -1.23
MRPL55-211ENST00000366738 ASCL1P50553 236 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 P2RX1P51575 399 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 RGS8P57771 180 aaPredicted RBP7.35□□□□□ -1.23
MRPL55-211ENST00000366738 FOXF1Q12946 379 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 DAZAP2Q15038 168 aaPredicted RBP7.35□□□□□ -1.23
MRPL55-211ENST00000366738 ACSF3Q4G176 576 aaPredicted RBP7.35□□□□□ -1.23
MRPL55-211ENST00000366738 IQCCQ4KMZ1 466 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 TBCELQ5QJ74 424 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 FKBP9P1Q75LS8 142 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 PLCZ1Q86YW0 608 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 MISPQ8IVT2 679 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 OR4K17Q8NGC6 315 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 OR1J4Q8NGS1 313 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 LINC01560Q8TB33 94 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 RASSF5Q8WWW0 418 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 PYDC1Q8WXC3 89 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 GEMIN6Q8WXD5 167 aaKnown RBP7.35□□□□□ -1.23
MRPL55-211ENST00000366738 PROX1Q92786 737 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 RNASE6Q93091 150 aaKnown RBP7.35□□□□□ -1.23
MRPL55-211ENST00000366738 PYURFQ96I23 114 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 RSRC1Q96IZ7 334 aaKnown RBP7.35□□□□□ -1.23
MRPL55-211ENST00000366738 C7orf34Q96L11 122 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 TIMP4Q99727 224 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 EXO5Q9H790 373 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 EXOSC3Q9NQT5 275 aaKnown RBP7.35□□□□□ -1.23
MRPL55-211ENST00000366738 B4GALT7Q9UBV7 327 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 TESQ9UGI8 421 aaKnown RBP7.35□□□□□ -1.23
MRPL55-211ENST00000366738 BAG5Q9UL15 447 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 BOKQ9UMX3 212 aaPredicted RBP7.35□□□□□ -1.23
MRPL55-211ENST00000366738 ZNF232Q9UNY5 417 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 AURKCQ9UQB9 309 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 VDAC3Q9Y277 283 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 C15orf41Q9Y2V0 281 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 SLC6A5Q9Y345 797 aa7.35□□□□□ -1.23
MRPL55-211ENST00000366738 CHD3Q12873 2000 aaKnown RBP7.35□□□□□ -1.23
MRPL55-211ENST00000366738 ROS1P08922 2347 aa7.34□□□□□ -1.23
MRPL55-211ENST00000366738 TUBAL3A6NHL2 446 aa7.34□□□□□ -1.23
MRPL55-211ENST00000366738 H3BNX3 289 aa7.34□□□□□ -1.23
MRPL55-211ENST00000366738 FFAR1O14842 300 aa7.34□□□□□ -1.23
MRPL55-211ENST00000366738 EIF4E2O60573 245 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms