RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 NTM-AS1Q6ZSK4 140 aa0.18□□□□□ -2.38
RNU6-238P-201ENST00000363313 H2AFVQ71UI9 128 aa0.18□□□□□ -2.38
RNU6-238P-201ENST00000363313 SNX32Q86XE0 403 aa0.18□□□□□ -2.38
RNU6-238P-201ENST00000363313 UNC45BQ8IWX7 931 aa0.18□□□□□ -2.38
RNU6-238P-201ENST00000363313 OR10G4Q8NGN3 311 aa0.18□□□□□ -2.38
RNU6-238P-201ENST00000363313 SLC25A36Q96CQ1 311 aa0.18□□□□□ -2.38
RNU6-238P-201ENST00000363313 CCDC114Q96M63 670 aa0.18□□□□□ -2.38
RNU6-238P-201ENST00000363313 C18orf15Q96N68 181 aa0.18□□□□□ -2.38
RNU6-238P-201ENST00000363313 CCT7Q99832 543 aa0.18□□□□□ -2.38
RNU6-238P-201ENST00000363313 ECSITQ9BQ95 431 aa0.18□□□□□ -2.38
RNU6-238P-201ENST00000363313 DNTTIP1Q9H147 329 aa0.18□□□□□ -2.38
RNU6-238P-201ENST00000363313 POLR3FQ9H1D9 316 aaPredicted RBP0.18□□□□□ -2.38
RNU6-238P-201ENST00000363313 DEFB127Q9H1M4 99 aa0.18□□□□□ -2.38
RNU6-238P-201ENST00000363313 SLC25A51Q9H1U9 297 aa0.18□□□□□ -2.38
RNU6-238P-201ENST00000363313 RPAP3Q9H6T3 665 aaPredicted RBP0.18□□□□□ -2.38
RNU6-238P-201ENST00000363313 AKIRIN1Q9H9L7 192 aaPredicted RBP0.18□□□□□ -2.38
RNU6-238P-201ENST00000363313 CFDP1Q9UEE9 299 aaPredicted RBP0.18□□□□□ -2.38
RNU6-238P-201ENST00000363313 SIGLEC9Q9Y336 463 aa0.18□□□□□ -2.38
RNU6-238P-201ENST00000363313 LAMB2P55268 1798 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 OR6C65A6NJZ3 312 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 H7C0S8 307 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 LGALS9O00182 355 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 CASKO14936 926 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 UGT2B17O75795 530 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 NDUFA7O95182 113 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 HSPA4LO95757 839 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 PRB4P10163 310 aaPredicted RBP0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 FMO3P31513 532 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 RIPPLY1Q0D2K3 151 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 PLD1Q13393 1074 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 PRAMEF8Q5VWM4 474 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 CYS1Q717R9 158 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 BIVMQ86UB2 503 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 NT5DC3Q86UY8 548 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 RP1L1Q8IWN7 2480 aaPredicted RBP0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 C15orf54Q8N8G6 183 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 FANK1Q8TC84 345 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 ACTRT1Q8TDG2 376 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 SDSLQ96GA7 329 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 SLC30A2Q9BRI3 323 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 ANGPTL4Q9BY76 406 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 CLMPQ9H6B4 373 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 POLD4Q9HCU8 107 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 KLHL28Q9NXS3 571 aa0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 WARS2Q9UGM6 360 aaKnown RBP0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 GPATCH8Q9UKJ3 1502 aaKnown RBP0.17□□□□□ -2.38
RNU6-238P-201ENST00000363313 CENPJQ9HC77 1338 aaPredicted RBP0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 ATP10DQ9P241 1426 aa0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 IGHV3OR16-8A0A075B7F1 116 aa0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 A6NIZ1 184 aa0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 INS-IGF2F8WCM5 200 aa0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 OVOL1O14753 267 aa0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 STX6O43752 255 aa0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 ZBTB14O43829 449 aa0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 ATP6V1G1O75348 118 aa0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 IGKV1-16P04430 117 aa0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 UBTFL1P0CB47 393 aaPredicted RBP0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 SCG2P13521 617 aa0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 XRCC1P18887 633 aaPredicted RBP0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 MARCKSP29966 332 aaPredicted RBP0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 CX3CR1P49238 355 aa0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 RAP1BP61224 184 aa0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 LOXL1Q08397 574 aaPredicted RBP0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 TSTA3Q13630 321 aaPredicted RBP0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 BTG3Q14201 252 aaPredicted RBP0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 PARP10Q53GL7 1025 aa0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 COA6Q5JTJ3 125 aaKnown RBP0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 MARCH8Q5T0T0 291 aa0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 FAHD2BQ6P2I3 314 aaPredicted RBP0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 USP50Q70EL3 339 aaPredicted RBP0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 PAQR7Q86WK9 346 aa0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 RIMKLAQ8IXN7 391 aa0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 ZNF679Q8IYX0 411 aa0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 ST20-AS1Q8NBB2 130 aa0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 PHYHIPQ92561 330 aa0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 BCL2L2Q92843 193 aaPredicted RBP0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 FAHD2AQ96GK7 314 aa0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 NARS2Q96I59 477 aaKnown RBP0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 BAG1Q99933 345 aaPredicted RBP0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 WRAP53Q9BUR4 548 aaKnown RBP0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 THUMPD3Q9BV44 507 aaKnown RBP0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 NAT10Q9H0A0 1025 aaKnown RBP0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 HOMER3Q9NSC5 361 aa0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 BCAP29Q9UHQ4 241 aa0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 SLC25A15Q9Y619 301 aa0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 AHDC1Q5TGY3 1603 aaPredicted RBP0.16□□□□□ -2.38
RNU6-238P-201ENST00000363313 SCN4AP35499 1836 aa0.15□□□□□ -2.38
RNU6-238P-201ENST00000363313 IGHV1OR21-1A0A087WYE8 117 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 IGHV5-10-1A0A0J9YXX1 117 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 PRSS37A4D1T9 235 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 E7ESA3 106 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 SOCS1O15524 211 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 DKC1O60832 514 aaKnown RBP eCLIP0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 GNA14O95837 355 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 CCNE2O96020 404 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 IGLV2-8P01709 118 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 C1GALT1C1LP0DN25 315 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 CD80P33681 288 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 ARRB1P49407 418 aaPredicted RBP0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 CASP9P55211 416 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms