RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 C17orf113A0A1B0GUU1 675 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 LRIT2A6NDA9 550 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 F8W036 122 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 ITGA5P08648 1049 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 SBK2P0C263 348 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 ITGB8P26012 769 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 IRS1P35568 1242 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 RPS27P42677 84 aaKnown RBP12.91□□□□□ -0.34
COL6A1-201ENST00000361866 BLOC1S1P78537 153 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 TRMT12Q53H54 448 aaKnown RBP12.91□□□□□ -0.34
COL6A1-201ENST00000361866 ASTLQ6HA08 431 aaPredicted RBP12.91□□□□□ -0.34
COL6A1-201ENST00000361866 FBXO46Q6PJ61 603 aaPredicted RBP12.91□□□□□ -0.34
COL6A1-201ENST00000361866 GTPBP8Q8N3Z3 284 aaPredicted RBP12.91□□□□□ -0.34
COL6A1-201ENST00000361866 DNAAF1Q8NEP3 725 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 OR52R1Q8NGF1 315 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 OR52I2Q8NH67 350 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 DPYSL5Q9BPU6 564 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 AUNIPQ9H7T9 357 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 TRAPPC4Q9Y296 219 aa12.91□□□□□ -0.34
COL6A1-201ENST00000361866 AHSA1O95433 338 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 IGHA2P01877 340 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 LIMS3P0CW19 117 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 LIMS4P0CW20 117 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 NPR2P20594 1047 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 RAB11BQ15907 218 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 ZNF79Q15937 498 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 ALG10Q5BKT4 473 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 SIGIRRQ6IA17 410 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 C1orf94Q6P1W5 598 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 ABHD17CQ6PCB6 329 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 KCTD18Q6PI47 426 aaPredicted RBP12.9□□□□□ -0.34
COL6A1-201ENST00000361866 SLC39A5Q6ZMH5 540 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 ZNF620Q6ZNG0 422 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 TECPR1Q7Z6L1 1165 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 OR2T4Q8NH00 348 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 DNMT3BQ9UBC3 853 aaKnown RBP12.9□□□□□ -0.34
COL6A1-201ENST00000361866 RBM7Q9Y580 266 aaKnown RBP12.9□□□□□ -0.34
COL6A1-201ENST00000361866 OR51B4Q9Y5P0 310 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 A0A0A6YYC8 382 aaPredicted RBP12.9□□□□□ -0.34
COL6A1-201ENST00000361866 I3L1I5 382 aaPredicted RBP12.9□□□□□ -0.34
COL6A1-201ENST00000361866 ZNF35P13682 527 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 NRG3P56975 720 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 STK11Q15831 433 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 DUSP5Q16690 384 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 TMEM31Q5JXX7 168 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 OR4C15Q8NGM1 316 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 TMEM106AQ96A25 262 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 ATF6BQ99941 703 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 LIN7BQ9HAP6 207 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 TEX13DA0A0J9YY54 714 aaPredicted RBP12.9□□□□□ -0.34
COL6A1-201ENST00000361866 FFAR1O14842 300 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 SOD1P00441 154 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 RAP2BP61225 183 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 LTBQ06643 244 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 FXNQ16595 210 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 SMUG1Q53HV7 270 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 GPR148Q8TDV2 347 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 SEMA4CQ9C0C4 833 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 V9GYH0 126 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 ANKRD31Q8N7Z5 1873 aa12.9□□□□□ -0.34
COL6A1-201ENST00000361866 MN1Q10571 1320 aaPredicted RBP12.9□□□□□ -0.34
COL6A1-201ENST00000361866 RGS11O94810 467 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 HSD11B1P28845 292 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 P2RY2P41231 377 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 AKR1C2P52895 323 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 AKR1C1Q04828 323 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 GPAT4Q86UL3 456 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 RDH10Q8IZV5 341 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 ANKRD53Q8N9V6 530 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 ZFYVE21Q9BQ24 234 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 SGPP1Q9BX95 441 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 ULBP3Q9BZM4 244 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 EMC7Q9NPA0 242 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 TAS2R8Q9NYW2 309 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 COL11A1P12107 1806 aaPredicted RBP12.89□□□□□ -0.35
COL6A1-201ENST00000361866 A0A1B0GWA3 101 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 ATP1B1P05026 303 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 GP1BBP13224 206 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 CPMP14384 443 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 BSGP35613 385 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 OPRD1P41143 372 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 CXADRP78310 365 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 MC2RQ01718 297 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 GRM7Q14831 915 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 IRF4Q15306 451 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 CD276Q5ZPR3 534 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 HEPHL1Q6MZM0 1159 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 ULK3Q6PHR2 472 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 NDUFAF7Q7L592 441 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 OR2AJ1Q8NGZ0 328 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 CNRIP1Q96F85 164 aaPredicted RBP12.89□□□□□ -0.35
COL6A1-201ENST00000361866 ORAI3Q9BRQ5 295 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 MED17Q9NVC6 651 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 PLEKHB1Q9UF11 243 aaPredicted RBP12.89□□□□□ -0.35
COL6A1-201ENST00000361866 ADAM18Q9Y3Q7 739 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 TMEM14AQ9Y6G1 99 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 NPIPA5E9PKD4 350 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 LGALS8O00214 317 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 UGT2B7P16662 529 aa12.89□□□□□ -0.35
COL6A1-201ENST00000361866 M6PRP20645 277 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms