RNA–Protein interactions for RNA: ENST00000361543.3

SGMS1-201, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best) BASIC

Gene SGMS1, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-201ENST00000361543 PRDX6P30041 224 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 APOBEC1P41238 236 aaKnown RBP6.82□□□□□ -1.32
SGMS1-201ENST00000361543 DIO1P49895 249 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 MVDP53602 400 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 RAC3P60763 192 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 DSTNP60981 165 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 CSNK2A1P68400 391 aaPredicted RBP6.82□□□□□ -1.32
SGMS1-201ENST00000361543 KCNJ10P78508 379 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 RBBP4Q09028 425 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 KLF10Q13118 480 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 NFYCQ13952 458 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 KEAP1Q14145 624 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 LARS2Q15031 903 aaKnown RBP6.82□□□□□ -1.32
SGMS1-201ENST00000361543 GTDC1Q4AE62 458 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 SYT14P1Q58G82 188 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 GCNT6Q5T4J0 391 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 INTS11Q5TA45 600 aaKnown RBP6.82□□□□□ -1.32
SGMS1-201ENST00000361543 ANKRD34AQ69YU3 496 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 SLC2A7Q6PXP3 512 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 TFAP2EQ6VUC0 442 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 STAC2Q6ZMT1 411 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 GRINAQ7Z429 371 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 MTDHQ86UE4 582 aaKnown RBP6.82□□□□□ -1.32
SGMS1-201ENST00000361543 TUSC5Q8IXB3 177 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 PEX5LQ8IYB4 626 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 SLC43A2Q8N370 569 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 BHLHE22Q8NFJ8 381 aaPredicted RBP6.82□□□□□ -1.32
SGMS1-201ENST00000361543 OR8J3Q8NGG0 315 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 CNOT9Q92600 299 aaKnown RBP6.82□□□□□ -1.32
SGMS1-201ENST00000361543 MBD6Q96DN6 1003 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 PIK3IP1Q96FE7 263 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 AURKBQ96GD4 344 aaPredicted RBP6.82□□□□□ -1.32
SGMS1-201ENST00000361543 LRRC37BQ96QE4 947 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 CGREF1Q99674 301 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 TACO1Q9BSH4 297 aaKnown RBP6.82□□□□□ -1.32
SGMS1-201ENST00000361543 CCDC106Q9BWC9 280 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 PAIP1Q9H074 479 aaKnown RBP6.82□□□□□ -1.32
SGMS1-201ENST00000361543 TMEM38AQ9H6F2 299 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 EVA1AQ9H8M9 152 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 A4GALTQ9NPC4 353 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 CTPS2Q9NRF8 586 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 NDE1Q9NXR1 346 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 KLHL9Q9P2J3 617 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 CHRNA9Q9UGM1 479 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 ADAM21Q9UKJ8 722 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 ZNF232Q9UNY5 417 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 IFT52Q9Y366 437 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 PCDHB14Q9Y5E9 798 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 DSCAMO60469 2012 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 ROS1P08922 2347 aa6.82□□□□□ -1.32
SGMS1-201ENST00000361543 DSPPQ9NZW4 1301 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 PRR14LQ5THK1 2151 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 A0A0G2JPF8 293 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 PRORSD1PA6NEY8 169 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 HNRNPCL2B2RXH8 293 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 HNRNPCL3B7ZW38 293 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 SULT2B1O00204 365 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 MRASO14807 208 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 CYTIPO60759 359 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 HNRNPCL1O60812 293 aaKnown RBP6.81□□□□□ -1.32
SGMS1-201ENST00000361543 ADAM11O75078 769 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 GCM2O75603 506 aaPredicted RBP6.81□□□□□ -1.32
SGMS1-201ENST00000361543 SERPINB7O75635 380 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 BCHEP06276 602 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 THBDP07204 575 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 YES1P07947 543 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 HNRNPCL4P0DMR1 293 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 TFPIP10646 304 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 KLK2P20151 261 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 PSMB1P20618 241 aaKnown RBP6.81□□□□□ -1.32
SGMS1-201ENST00000361543 SLC6A2P23975 617 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 HTR3AP46098 478 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 IDH2P48735 452 aaKnown RBP6.81□□□□□ -1.32
SGMS1-201ENST00000361543 RASGEF1BQ0VAM2 473 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 RGNQ15493 299 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 MAPK11Q15759 364 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 CYP51A1Q16850 503 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 DEFB113Q30KQ7 82 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 LIN52Q52LA3 116 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 MRPL2Q5T653 305 aaKnown RBP6.81□□□□□ -1.32
SGMS1-201ENST00000361543 ABLIM2Q6H8Q1 611 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 C22orf34Q6ZV56 151 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 NUFIP2Q7Z417 695 aaKnown RBP6.81□□□□□ -1.32
SGMS1-201ENST00000361543 PIGWQ7Z7B1 504 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 CXorf67Q86X51 503 aaPredicted RBP6.81□□□□□ -1.32
SGMS1-201ENST00000361543 SNX32Q86XE0 403 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 ZNF440Q8IYI8 595 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 C11orf65Q8NCR3 313 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 CCDC197Q8NCU1 140 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 BBS10Q8TAM1 723 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 SLC35B4Q969S0 331 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 ZHX1-C8orf76Q96EF9 292 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 ANKRD27Q96NW4 1050 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 CCT8L2Q96SF2 557 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 ZNF607Q96SK3 696 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 HOPXQ9BPY8 73 aaPredicted RBP6.81□□□□□ -1.32
SGMS1-201ENST00000361543 PSD2Q9BQI7 771 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 ACTR6Q9GZN1 396 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 UBTD1Q9HAC8 227 aa6.81□□□□□ -1.32
SGMS1-201ENST00000361543 EFCAB1Q9HAE3 211 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms